RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 CCDC47Q96A33 483 aaKnown RBP19.71■□□□□ 0.75
PDLIM2-214ENST00000452226 HPDLQ96IR7 371 aa19.71■□□□□ 0.75
PDLIM2-214ENST00000452226 GKN1Q9NS71 199 aa19.71■□□□□ 0.75
PDLIM2-214ENST00000452226 DMAC2Q9NW81 257 aa19.71■□□□□ 0.75
PDLIM2-214ENST00000452226 RAB23Q9ULC3 237 aa19.71■□□□□ 0.75
PDLIM2-214ENST00000452226 ANAPC1Q9H1A4 1944 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 PDXKO00764 312 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 GABRDO14764 452 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 HCRTO43612 131 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 LMNB2Q03252 620 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 PNOCQ13519 176 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 SNRNP35Q16560 246 aaKnown RBP19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 CCDC142Q17RM4 750 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 RSPO4Q2I0M5 234 aaPredicted RBP19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 ITPRIPL2Q3MIP1 535 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 DGKKQ5KSL6 1271 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 TXNDC8Q6A555 127 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 SPATA2LQ8IUW3 424 aaPredicted RBP19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 SLC9A9Q8IVB4 645 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 ELOA2Q8IYF1 753 aaPredicted RBP19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 SPATA20Q8TB22 786 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 USP13Q92995 863 aaPredicted RBP19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 TDP1Q9NUW8 608 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 GMEB2Q9UKD1 530 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 CCL26Q9Y258 94 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 GREB1Q4ZG55 1949 aa19.7■□□□□ 0.74
PDLIM2-214ENST00000452226 SOBPA7XYQ1 873 aa19.69■□□□□ 0.74
PDLIM2-214ENST00000452226 PRR5-ARHGAP8B1AHC4 643 aa19.69■□□□□ 0.74
PDLIM2-214ENST00000452226 GADD45BO75293 160 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-214ENST00000452226 CYP2J2P51589 502 aa19.69■□□□□ 0.74
PDLIM2-214ENST00000452226 ARHGAP8P85298 464 aa19.69■□□□□ 0.74
PDLIM2-214ENST00000452226 Q6ZS52 159 aa19.69■□□□□ 0.74
PDLIM2-214ENST00000452226 DPH6Q7L8W6 267 aa19.69■□□□□ 0.74
PDLIM2-214ENST00000452226 MON1AQ86VX9 555 aa19.69■□□□□ 0.74
PDLIM2-214ENST00000452226 WDR49Q8IV35 697 aa19.69■□□□□ 0.74
PDLIM2-214ENST00000452226 UXTQ9UBK9 157 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-214ENST00000452226 MED19A0JLT2 244 aaPredicted RBP19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 NOL4O94818 638 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 CYP24A1Q07973 514 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 PSMD6Q15008 389 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 CFAP221Q4G0U5 840 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 FAM171BQ6P995 826 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 LIMS2Q7Z4I7 341 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 SCN4BQ8IWT1 228 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 GUF1Q8N442 669 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 RDH13Q8NBN7 331 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 TRMT2BQ96GJ1 504 aaKnown RBP19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 FUBP3Q96I24 572 aaKnown RBP eCLIP19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 MYRFLQ96LU7 910 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 FAM83CQ9BQN1 747 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 GZF1Q9H116 711 aaPredicted RBP19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 KIF9Q9HAQ2 790 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 TRAF3IP3Q9Y228 551 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 PTPRDP23468 1912 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 SDK1Q7Z5N4 2213 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 RALGAPA1Q6GYQ0 2036 aa19.68■□□□□ 0.74
PDLIM2-214ENST00000452226 ATP2C2O75185 946 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 TADA3O75528 432 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 KIF20AO95235 890 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 LMO2P25791 158 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 RUNX3Q13761 415 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 CCINQ13939 588 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 TRIM68Q6AZZ1 485 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 C4orf50Q6ZRC1 276 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 TRAPPC11Q7Z392 1133 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 KBTBD7Q8WVZ9 684 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 GSDMAQ96QA5 445 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 MMS19Q96T76 1030 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 SYT15Q9BQS2 421 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 EBF3Q9H4W6 596 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 HPS4Q9NQG7 708 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 CDV3Q9UKY7 258 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 CDH9Q9ULB4 789 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 USP18Q9UMW8 372 aa19.67■□□□□ 0.74
PDLIM2-214ENST00000452226 SPTBN2O15020 2390 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 CHURC1-FNTBB4DL54 471 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 EXOC3O60645 756 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 PAPSS2O95340 614 aaPredicted RBP19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 DLATP10515 647 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 TNNI1P19237 187 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 MAGEA11P43364 429 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 FNTBP49356 437 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 PSMC1P62191 440 aaKnown RBP19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 DMWDQ09019 674 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 ZNF268Q14587 947 aaPredicted RBP19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 LPAL2Q16609 132 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 NFIL3Q16649 462 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 CC2D1AQ6P1N0 951 aaPredicted RBP19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 SYNPOQ8N3V7 929 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 RIN3Q8TB24 985 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 FNBP1Q96RU3 617 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 TRPC7Q9HCX4 862 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 C2orf42Q9NWW7 574 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 MAGEC2Q9UBF1 373 aaPredicted RBP19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 PCDHA5Q9Y5H7 936 aa19.66■□□□□ 0.74
PDLIM2-214ENST00000452226 OTOL1A6NHN0 477 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 K7ESF4 209 aa19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 NR3C1P04150 777 aa19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 PDGFRBP09619 1106 aa19.65■□□□□ 0.74
PDLIM2-214ENST00000452226 WARSP23381 471 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms