RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 RTN3O95197 1032 aaPredicted RBP9.42□□□□□ -0.9
COL8A1-203ENST00000452013 CAVIN2O95810 425 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 HMGA1P17096 107 aaKnown RBP9.42□□□□□ -0.9
COL8A1-203ENST00000452013 CEBPBP17676 345 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 DDX6P26196 483 aaKnown RBP eCLIP9.42□□□□□ -0.9
COL8A1-203ENST00000452013 PPP3CCP48454 512 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 GPR15P49685 360 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 RAD23BP54727 409 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 MFAP3P55082 362 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 TDGQ13569 410 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 PTPN21Q16825 1174 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 CCDC142Q17RM4 750 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 SLC5A9Q2M3M2 681 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 ANO6Q4KMQ2 910 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 HSP90AA4PQ58FG1 418 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 SDHAF4Q5VUM1 108 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 C11orf57Q6ZUT1 292 aaPredicted RBP9.42□□□□□ -0.9
COL8A1-203ENST00000452013 PAQR9Q6ZVX9 377 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 RRAGAQ7L523 313 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 ZSCAN30Q86W11 494 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 GAS2L3Q86XJ1 694 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 TMC8Q8IU68 726 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 NPAS3Q8IXF0 933 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 FUKQ8N0W3 1084 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 NUP93Q8N1F7 819 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 C12orf29Q8N999 325 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 SHKBP1Q8TBC3 707 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 SLC2A14Q8TDB8 520 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 ING5Q8WYH8 240 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 MRPS31Q92665 395 aaKnown RBP9.42□□□□□ -0.9
COL8A1-203ENST00000452013 EDAQ92838 391 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 E2F7Q96AV8 911 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 TCEAL4Q96EI5 215 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 TRMT2BQ96GJ1 504 aaKnown RBP9.42□□□□□ -0.9
COL8A1-203ENST00000452013 SMARCD1Q96GM5 515 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 PDLIM2Q96JY6 352 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 BPIFA3Q9BQP9 254 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 SLITRK6Q9H5Y7 841 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 TASP1Q9H6P5 420 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 UBE2TQ9NPD8 197 aaPredicted RBP9.42□□□□□ -0.9
COL8A1-203ENST00000452013 DMAP1Q9NPF5 467 aaPredicted RBP9.42□□□□□ -0.9
COL8A1-203ENST00000452013 RTN4Q9NQC3 1192 aaKnown RBP9.42□□□□□ -0.9
COL8A1-203ENST00000452013 GCNT4Q9P109 453 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 SORCS3Q9UPU3 1222 aa9.42□□□□□ -0.9
COL8A1-203ENST00000452013 BECN2A8MW95 431 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 MOSPD3O75425 235 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 ECI2O75521 394 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 F11P03951 625 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 PAEPP09466 180 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 FAM200BP0CF97 657 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 VDRP11473 427 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 CCDC130P13994 396 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 GJA1P17302 382 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 SLC9A1P19634 815 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 MSNP26038 577 aaKnown RBP9.41□□□□□ -0.9
COL8A1-203ENST00000452013 PON1P27169 355 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 YWHAQP27348 245 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 ADORA2BP29275 332 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 CCR2P41597 374 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 ZNF165P49910 485 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 TPM4P67936 248 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 ZXDAP98168 799 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 ORC1Q13415 861 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 MTMR3Q13615 1198 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 STILQ15468 1287 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 TEAD2Q15562 447 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 SGO2Q562F6 1265 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 FKBP15Q5T1M5 1219 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 GPR158Q5T848 1215 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 CDKAL1Q5VV42 579 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 ARHGAP17Q68EM7 881 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 PHLDB3Q6NSJ2 640 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 TMEM270Q6UE05 265 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 GAREM2Q75VX8 874 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 FAM35AQ86V20 835 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 SLC44A3Q8N4M1 653 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 SLC4A11Q8NBS3 891 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 SMARCD2Q92925 531 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 TWNKQ96RR1 684 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 ARID3AQ99856 593 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 CRACR2AQ9BSW2 395 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 C1QTNF1Q9BXJ1 281 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 UBXN6Q9BZV1 441 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 VPS16Q9H269 839 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 IL21Q9HBE4 155 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 ZFP14Q9HCL3 533 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 CSNK1G1Q9HCP0 422 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 ZNF334Q9HCZ1 680 aaPredicted RBP9.41□□□□□ -0.9
COL8A1-203ENST00000452013 FAM49BQ9NUQ9 324 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 TRPM5Q9NZQ8 1165 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 HESX1Q9UBX0 185 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 HMGXB4Q9UGU5 601 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 MUTYHQ9UIF7 546 aa9.41□□□□□ -0.9
COL8A1-203ENST00000452013 SYCE3A1L190 88 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 LRRC10BA6NIK2 292 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 DPYSL4O14531 572 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 ASGR2P07307 311 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 CD19P15391 556 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 PFKLP17858 780 aa9.4□□□□□ -0.9
COL8A1-203ENST00000452013 ACO1P21399 889 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms