RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 PTPN1P18031 435 aaKnown RBP17.11■□□□□ 0.33
SGCE-208ENST00000450385 ANXA13P27216 316 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 KPNA1P52294 538 aaPredicted RBP17.11■□□□□ 0.33
SGCE-208ENST00000450385 NOP14P78316 857 aaKnown RBP17.11■□□□□ 0.33
SGCE-208ENST00000450385 NCOA4Q13772 614 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 LRRC32Q14392 662 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 DDR2Q16832 855 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 DGKKQ5KSL6 1271 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 INTS8Q75QN2 995 aaKnown RBP17.11■□□□□ 0.33
SGCE-208ENST00000450385 OR6B3Q8NGW1 331 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 ELOVL4Q9GZR5 314 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 DNAI2Q9GZS0 605 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 CHRDQ9H2X0 955 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 RMND1Q9NWS8 449 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 MTF2Q9Y483 593 aaPredicted RBP17.11■□□□□ 0.33
SGCE-208ENST00000450385 PCDHGA2Q9Y5H1 932 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 KIF26AQ9ULI4 1882 aaPredicted RBP17.1■□□□□ 0.33
SGCE-208ENST00000450385 SHISA7A6NL88 538 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 LMNAP02545 664 aaKnown RBP17.1■□□□□ 0.33
SGCE-208ENST00000450385 USP17L7P0C7H9 530 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 CD72P21854 359 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 GRIK1P39086 918 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 MYL6P60660 151 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 BIRC3Q13489 604 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 ITPRIPL2Q3MIP1 535 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 ZACNQ401N2 412 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 COBLL1Q53SF7 1204 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 ZNF667Q5HYK9 610 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 STXBP5Q5T5C0 1151 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 DENND5BQ6ZUT9 1274 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 FRMD5Q7Z6J6 570 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 ELOA2Q8IYF1 753 aaPredicted RBP17.1■□□□□ 0.33
SGCE-208ENST00000450385 MAB21L3Q8N8X9 362 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 B3GALNT2Q8NCR0 500 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 TTLL2Q9BWV7 592 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 FAM124BQ9H5Z6 455 aaPredicted RBP17.1■□□□□ 0.33
SGCE-208ENST00000450385 CRTAC1Q9NQ79 661 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 MAGED2Q9UNF1 606 aaPredicted RBP17.1■□□□□ 0.33
SGCE-208ENST00000450385 ATP8B3O60423 1300 aa17.1■□□□□ 0.33
SGCE-208ENST00000450385 WDR87Q6ZQQ6 2873 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 TRAV19A0A0A6YYK7 116 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 LRRIQ3A6PVS8 624 aaPredicted RBP17.09■□□□□ 0.33
SGCE-208ENST00000450385 A8MXQ7 604 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 PDGFRBP09619 1106 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 GTF2H1P32780 548 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 CYP4F8P98187 520 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 CYP27A1Q02318 531 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 FAM160A1Q05DH4 1040 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 PDGFRLQ15198 375 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 ZNF699Q32M78 642 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 EDRF1Q3B7T1 1238 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 TDRD10Q5VZ19 366 aaKnown RBP17.09■□□□□ 0.33
SGCE-208ENST00000450385 SCARA3Q6AZY7 606 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 CC2D1AQ6P1N0 951 aaPredicted RBP17.09■□□□□ 0.33
SGCE-208ENST00000450385 UNC93AQ86WB7 457 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 SCN4BQ8IWT1 228 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 MAML2Q8IZL2 1156 aaPredicted RBP17.09■□□□□ 0.33
SGCE-208ENST00000450385 NELL1Q92832 810 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 MYLPFQ96A32 169 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 RSPRY1Q96DX4 576 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 PCED1BQ96HM7 432 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 TIGD1Q96MW7 591 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 GSDMAQ96QA5 445 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 FAM83CQ9BQN1 747 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 LMAN1LQ9HAT1 526 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 COMMD8Q9NX08 183 aa17.09■□□□□ 0.33
SGCE-208ENST00000450385 ATP2C2O75185 946 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 CHRNB1P11230 501 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 KRT13P13646 458 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 BDNFP23560 247 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 PSMC2P35998 433 aaKnown RBP17.08■□□□□ 0.32
SGCE-208ENST00000450385 CCR3P51677 355 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 TXNDC8Q6A555 127 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 OVCA2Q8WZ82 227 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 USP13Q92995 863 aaPredicted RBP17.08■□□□□ 0.32
SGCE-208ENST00000450385 LRRC3BQ96PB8 259 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 MRPL45Q9BRJ2 306 aaKnown RBP17.08■□□□□ 0.32
SGCE-208ENST00000450385 PRMT8Q9NR22 394 aaPredicted RBP17.08■□□□□ 0.32
SGCE-208ENST00000450385 GKN1Q9NS71 199 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 ZSCAN32Q9NX65 697 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 TRPM5Q9NZQ8 1165 aa17.08■□□□□ 0.32
SGCE-208ENST00000450385 NXF1Q9UBU9 619 aaKnown RBP17.08■□□□□ 0.32
SGCE-208ENST00000450385 NCANO14594 1321 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 SPECC1L-ADORA2AF8WAN1 911 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 STX10O60499 249 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 KINO60870 393 aaKnown RBP17.07■□□□□ 0.32
SGCE-208ENST00000450385 LRRN2O75325 713 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 RTN3O95197 1032 aaPredicted RBP17.07■□□□□ 0.32
SGCE-208ENST00000450385 PAPSS2O95340 614 aaPredicted RBP17.07■□□□□ 0.32
SGCE-208ENST00000450385 SMC2O95347 1197 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 PRAMEF12O95522 483 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 NR2F2P24468 414 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 CCNE1P24864 410 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 CTHP32929 405 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 GPR15P49685 360 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 VAMP7P51809 220 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 ADAM9Q13443 819 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 CEP135Q66GS9 1140 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 SV2AQ7L0J3 742 aa17.07■□□□□ 0.32
SGCE-208ENST00000450385 ASCL5Q7RTU5 278 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms