RNA–Protein interactions for RNA: ENST00000449924.6

RBFOX2-210, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-210ENST00000449924 TRAPPC3O43617 180 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 SRGAP2O75044 1071 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 MTA2O94776 668 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 GJB5O95377 273 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 LINC00271P0C7V0 271 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 PCSK1P29120 753 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 HADHBP55084 474 aaKnown RBP11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 RPL7AP62424 266 aaKnown RBP11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 MESDQ14696 234 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 CLEC20AQ6ZU45 233 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 CMTR2Q8IYT2 770 aaKnown RBP11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 THEM5Q8N1Q8 247 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 ZMIZ2Q8NF64 920 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 SPATA18Q8TC71 538 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 MYLPFQ96A32 169 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 C18orf8Q96DM3 657 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 PIWIL1Q96J94 861 aaKnown RBP11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 SMOQ99835 787 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 MED10Q9BTT4 135 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 HTATIP2Q9BUP3 242 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 TLR10Q9BXR5 811 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 DUSP16Q9BY84 665 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 HESX1Q9UBX0 185 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 GOLGA8SH3BPF8 625 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 SYN3O14994 580 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 CALB1P05937 261 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 MYBL1P10243 752 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 TERF1P54274 439 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 MAP3K7CLP57077 242 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 HTRA4P83105 476 aaPredicted RBP11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 PLCB3Q01970 1234 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 BST2Q10589 180 aaKnown RBP11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 PPP1R15BQ5SWA1 713 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 MEI1Q5TIA1 1274 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 LIN9Q5TKA1 542 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 PRSS55Q6UWB4 352 aaPredicted RBP11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 DAAM2Q86T65 1068 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 TMEM110Q86TL2 294 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 SCUBE3Q8IX30 993 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 RNF168Q8IYW5 571 aaPredicted RBP11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 JOSD2Q8TAC2 188 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 CLEC4CQ8WTT0 213 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 HERVK_113Q902F9 699 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 NDRG1Q92597 394 aaKnown RBP11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 YME1L1Q96TA2 773 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 NAPGQ99747 312 aaPredicted RBP11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 UVRAGQ9P2Y5 699 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 ALG6Q9Y672 507 aa11.98□□□□□ -0.49
RBFOX2-210ENST00000449924 GBF1Q92538 1859 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 PLXNA4Q9HCM2 1894 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 SF3B1O75533 1304 aaKnown RBP eCLIP11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 CTAGE9A4FU28 777 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 TMEM110-MUSTN1A8MSY1 372 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 HAX1O00165 279 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 TBC1D4O60343 1298 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 URI1O94763 535 aaPredicted RBP11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 BDNFP23560 247 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 RPL34P49207 117 aaKnown RBP11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 BCAT1P54687 386 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 AMPD2Q01433 879 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 OGDHQ02218 1023 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 ZNF268Q14587 947 aaPredicted RBP11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 TAF5Q15542 800 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 SLC39A12Q504Y0 691 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 DAB2IPQ5VWQ8 1189 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 FAM183BPQ6ZVS7 135 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 MTERF4Q7Z6M4 381 aaKnown RBP11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 NT5DC3Q86UY8 548 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 FAM35AQ86V20 835 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 PIGZQ86VD9 579 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 SLC39A11Q8N1S5 342 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 COLGALT1Q8NBJ5 622 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 FEZF2Q8TBJ5 459 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 KHSRPQ92945 711 aaKnown RBP eCLIP11.97□□□□□ -0.493e-6■■■■□ 22.8
RBFOX2-210ENST00000449924 TRIM11Q96F44 468 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 ALS2CR12Q96Q35 445 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 ZCWPW1Q9H0M4 648 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 ANAPC7Q9UJX3 599 aa11.97□□□□□ -0.49
RBFOX2-210ENST00000449924 LCHNA4D1U4 455 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 TMEM191CA6NGB0 347 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 PAPSS1O43252 624 aaPredicted RBP11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 AP1G2O75843 785 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 LCP1P13796 627 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 NDUFV1P49821 464 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 ZNF252P-AS1Q0IIN9 211 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 IFI16Q16666 785 aaKnown RBP11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 CTXN3Q4LDR2 81 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 C9orf50Q5SZB4 431 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 PAPD7Q5XG87 772 aaKnown RBP11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 OR6B2Q6IFH4 312 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 PPP1R2P3Q6NXS1 205 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 PSRC1Q6PGN9 363 aaPredicted RBP11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 STK32AQ8WU08 396 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 MCRS1Q96EZ8 462 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 ZNF558Q96NG5 402 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 PSMB7Q99436 277 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 MIS12Q9H081 205 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 SYNCQ9H7C4 482 aa11.96□□□□□ -0.49
RBFOX2-210ENST00000449924 KRT82Q9NSB4 513 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms