RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 PDE12Q6L8Q7 609 aaKnown RBP10.47□□□□□ -0.73
CCDC171-203ENST00000449575 EP400NLQ6ZTU2 488 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 ACOT1Q86TX2 421 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 METTL23Q86XA0 190 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 TMEM86AQ8N2M4 240 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 UBR7Q8N806 425 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 C12orf76Q8N812 135 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-203ENST00000449575 STKLD1Q8NE28 680 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 FAM71BQ8TC56 605 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 APOL5Q9BWW9 433 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 LSM14BQ9BX40 385 aaKnown RBP10.47□□□□□ -0.73
CCDC171-203ENST00000449575 EMILIN2Q9BXX0 1053 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 ELOVL4Q9GZR5 314 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 ZCWPW1Q9H0M4 648 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 ACP6Q9NPH0 428 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 DSEQ9UL01 958 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 GTPBP10A4D1E9 387 aaKnown RBP10.47□□□□□ -0.73
CCDC171-203ENST00000449575 RFPL2O75678 378 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 ADH1AP07327 375 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 ACO1P21399 889 aaKnown RBP10.47□□□□□ -0.73
CCDC171-203ENST00000449575 ADCY1Q08828 1119 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 CETN1Q12798 172 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 RAB33AQ14088 237 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 ARHGAP44Q17R89 818 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 SYT15Q9BQS2 421 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 TACO1Q9BSH4 297 aaKnown RBP10.47□□□□□ -0.73
CCDC171-203ENST00000449575 SNX25Q9H3E2 840 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 CXorf56Q9H5V9 222 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC171-203ENST00000449575 FAM207AQ9NSI2 230 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-203ENST00000449575 TMEM30AQ9NV96 361 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 APEX2Q9UBZ4 518 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 STK39Q9UEW8 545 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 SLC27A5Q9Y2P5 690 aa10.47□□□□□ -0.73
CCDC171-203ENST00000449575 TCF20Q9UGU0 1960 aaKnown RBP10.46□□□□□ -0.73
CCDC171-203ENST00000449575 H7C4K7 107 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 CLDN5O00501 218 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 CILPO75339 1184 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 ABLIM3O94929 683 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 PAX3P23760 479 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 LHX1P48742 406 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 INCA1Q0VD86 236 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 NR1I3Q14994 352 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 DNAJC21Q5F1R6 531 aaKnown RBP10.46□□□□□ -0.73
CCDC171-203ENST00000449575 INTS6LQ5JSJ4 861 aaKnown RBP10.46□□□□□ -0.73
CCDC171-203ENST00000449575 IQCEQ6IPM2 695 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 TADA2BQ86TJ2 420 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 ANKRD20A12PQ8NF67 263 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 ZNF461Q8TAF7 563 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 ACBD6Q9BR61 282 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 MED4Q9NPJ6 270 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 CLDND1Q9NY35 253 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 CLEC1BQ9P126 229 aa10.46□□□□□ -0.73
CCDC171-203ENST00000449575 MTMR11A4FU01 709 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 GLUD1P00367 558 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 CACNA2D1P54289 1103 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 UBASH3AP57075 661 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 DUSP4Q13115 394 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 GPR17Q13304 367 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 ADAM15Q13444 863 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 CLUL1Q15846 466 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 CTC1Q2NKJ3 1217 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 MDH1BQ5I0G3 518 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 KLHDC7AQ5VTJ3 777 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 GPR65Q8IYL9 337 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 THEM5Q8N1Q8 247 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 CEP112Q8N8E3 955 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 GPR88Q9GZN0 384 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 GANQ9H2C0 597 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 MAN1C1Q9NR34 630 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 FAM49BQ9NUQ9 324 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 SSX2IPQ9Y2D8 614 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 DENND4CQ5VZ89 1909 aa10.46□□□□□ -0.74
CCDC171-203ENST00000449575 OBSL1O75147 1896 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 OR6C75A6NL08 312 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 P4HA1P13674 534 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 CCDC130P13994 396 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 PTPN1P18031 435 aaKnown RBP10.45□□□□□ -0.74
CCDC171-203ENST00000449575 SSTR3P32745 418 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-203ENST00000449575 GPR15P49685 360 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 RAD23BP54727 409 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 GNG11P61952 73 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 SKIV2LQ15477 1246 aaKnown RBP10.45□□□□□ -0.74
CCDC171-203ENST00000449575 FAM171BQ6P995 826 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 TMEM270Q6UE05 265 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 PAQR9Q6ZVX9 377 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 EFHBQ8N7U6 833 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 SLC4A11Q8NBS3 891 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 B3GALNT2Q8NCR0 500 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 KREMEN2Q8NCW0 462 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 MAFAQ8NHW3 353 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-203ENST00000449575 PCED1BQ96HM7 432 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 ERGIC2Q96RQ1 377 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 ZSWIM1Q9BR11 485 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 CYP3A43Q9HB55 503 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 NLRC4Q9NPP4 1024 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 ABI2Q9NYB9 513 aaPredicted RBP10.45□□□□□ -0.74
CCDC171-203ENST00000449575 FBXW11Q9UKB1 542 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 DNAJC12Q9UKB3 198 aa10.45□□□□□ -0.74
CCDC171-203ENST00000449575 PPP2R2CQ9Y2T4 447 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms