RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.93□□□□□ -0.34
UBE3B-204ENST00000449510 CHCHD3Q9NX63 227 aaKnown RBP12.93□□□□□ -0.34
UBE3B-204ENST00000449510 GTSE1Q9NYZ3 720 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 TLK1Q9UKI8 766 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 FSCN2O14926 492 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 ANPEPP15144 967 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 PDGFRAP16234 1089 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 OSBPP22059 807 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 JAM2P57087 298 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 THAP11Q96EK4 314 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 COA1Q9GZY4 146 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 EPS15L1Q9UBC2 864 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 LYPLA1O75608 230 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-204ENST00000449510 APOEP02649 317 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 CALB1P05937 261 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 GLRA2P23416 452 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 MGAT5Q09328 741 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 FSTL1Q12841 308 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 R3HDM1Q15032 1099 aaKnown RBP12.93□□□□□ -0.34
UBE3B-204ENST00000449510 TFDP3Q5H9I0 405 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 EFHC1Q5JVL4 640 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 RARS2Q5T160 578 aaKnown RBP12.93□□□□□ -0.34
UBE3B-204ENST00000449510 NPNTQ6UXI9 565 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 ZCCHC9Q8N567 271 aaKnown RBP12.93□□□□□ -0.34
UBE3B-204ENST00000449510 DIS3LQ8TF46 1054 aaKnown RBP12.93□□□□□ -0.34
UBE3B-204ENST00000449510 EPAS1Q99814 870 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 CDCA7Q9BWT1 371 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-204ENST00000449510 WARS2Q9UGM6 360 aaKnown RBP12.93□□□□□ -0.34
UBE3B-204ENST00000449510 PLA2G4CQ9UP65 541 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 NCANO14594 1321 aa12.93□□□□□ -0.34
UBE3B-204ENST00000449510 NFIBO00712 420 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 HNRNPCL1O60812 293 aaKnown RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 CRCPO75575 148 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 LYNP07948 512 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 KRT7P08729 469 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 FGFR3P22607 806 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 TPP2P29144 1249 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 GLRBP48167 497 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 MRPS22P82650 360 aaKnown RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 ALKBH8Q96BT7 664 aaKnown RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 PRR11Q96HE9 360 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 ASCC2Q9H1I8 757 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 SEMA6AQ9H2E6 1030 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 RARRES1P49788 294 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 FLOT2Q14254 428 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 COBLL1Q53SF7 1204 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 ACBD5Q5T8D3 534 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 TTC13Q8NBP0 860 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 SERPINI1Q99574 410 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 FAM49BQ9NUQ9 324 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 OCRLQ01968 901 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 AP1B1Q10567 949 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 CYLC2Q14093 348 aaPredicted RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 OASLQ15646 514 aaKnown RBP12.92□□□□□ -0.34
UBE3B-204ENST00000449510 TUBGCP5Q96RT8 1024 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 MMP19Q99542 508 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 HESX1Q9UBX0 185 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 TAGLN3Q9UI15 199 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 PCDHA2Q9Y5H9 948 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 GJA3Q9Y6H8 435 aa12.92□□□□□ -0.34
UBE3B-204ENST00000449510 RIMBP3CA6NJZ7 1639 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 RIMBP3BA6NNM3 1639 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 RIMBP3Q9UFD9 1639 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 ARHGAP10A1A4S6 786 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 CAPN8A6NHC0 703 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 TCF4P15884 667 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 GALK1P51570 392 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 MORF4L2Q15014 288 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 PARP6Q2NL67 630 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 GRAMD4Q6IC98 578 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 FAM81AQ8TBF8 368 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 KLHL4Q9C0H6 718 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 BCAP29Q9UHQ4 241 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 TRPC5Q9UL62 973 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-204ENST00000449510 MYH7BA7E2Y1 1941 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 ASMTLO95671 621 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 RAP1GAPP47736 663 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 VCPP55072 806 aaKnown RBP12.91□□□□□ -0.34
UBE3B-204ENST00000449510 GRIK3Q13003 919 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 ITGA9Q13797 1035 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 ZNF667Q5HYK9 610 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 ANKRD22Q5VYY1 191 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 FAM71AQ8IYT1 594 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 ZNF606Q8WXB4 792 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 TAAR1Q96RJ0 339 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 APOL2Q9BQE5 337 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 SIKE1Q9BRV8 207 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 COPS7BQ9H9Q2 264 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-204ENST00000449510 C2CD2LO14523 706 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 CSPG5O95196 566 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 PMLP29590 882 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 RAB27AP51159 221 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 RTP1P59025 263 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 TTLL12Q14166 644 aaPredicted RBP12.91□□□□□ -0.34
UBE3B-204ENST00000449510 C16orf72Q14CZ0 275 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 MCF2L2Q86YR7 1114 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 ULK2Q8IYT8 1036 aa12.91□□□□□ -0.34
UBE3B-204ENST00000449510 EXD1Q8NHP7 514 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms