RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.46□□□□□ -1.22
BEST1-202ENST00000449131 MTHFD1LQ6UB35 978 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 FBXO16Q8IX29 292 aaPredicted RBP7.46□□□□□ -1.22
BEST1-202ENST00000449131 HSD17B14Q9BPX1 270 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 SPOCK3Q9BQ16 436 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 ANLNQ9NQW6 1124 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 NR2E1Q9Y466 385 aa7.46□□□□□ -1.22
BEST1-202ENST00000449131 LOC100653049A0A140TA62 436 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 TGFB1I1O43294 461 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 HNRNPCL1O60812 293 aaKnown RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 KRT34O76011 436 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 CD4P01730 458 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 HSPA8P11142 646 aaKnown RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 XPAP23025 273 aaPredicted RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 CCND1P24385 295 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 CNTN2Q02246 1040 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 MCL1Q07820 350 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 LAMC2Q13753 1193 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 CHI3L2Q15782 390 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 MFSD7Q6UXD7 560 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 LCA5Q86VQ0 697 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 TRIML2Q8N7C3 387 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 SLC7A14Q8TBB6 771 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 ZNF384Q8TF68 577 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 INPP4AQ96PE3 977 aaPredicted RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 PURBQ96QR8 312 aaKnown RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 MAGEB5Q9BZ81 275 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 SP110Q9HB58 689 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 SARS2Q9NP81 518 aaKnown RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 ABT1Q9ULW3 272 aaKnown RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 MTO1Q9Y2Z2 717 aaKnown RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 VTNP04004 478 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 C6orf222P0C671 652 aaPredicted RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 STAG3L1P0CL83 205 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 CXCL8P10145 99 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 VDRP11473 427 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 EEF1B2P24534 225 aaKnown RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 DSG3P32926 999 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 C1QBPQ07021 282 aaKnown RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 SNAPC2Q13487 334 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 TTC39BQ5VTQ0 682 aaPredicted RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 NAIF1Q69YI7 327 aaPredicted RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 NIPA1Q7RTP0 329 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 NLRP9Q7RTR0 991 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 MAP4K3Q8IVH8 894 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 FUKQ8N0W3 1084 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 ZNF669Q96BR6 464 aaPredicted RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 ZNF518BQ9C0D4 1074 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 NEUROG2Q9H2A3 272 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 KIF9Q9HAQ2 790 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 SUN2Q9UH99 717 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 UBA6A0AVT1 1052 aaPredicted RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 UNCXA6NJT0 531 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 GSTA4O15217 222 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 ADRB2P07550 413 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 ITGB5P18084 799 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 TM4SF1P30408 202 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 SKOR1P84550 965 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 PTPN11Q06124 597 aaPredicted RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 LAMTOR4Q0VGL1 99 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 ITIH4Q14624 930 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 USP10Q14694 798 aaKnown RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 PDK1Q15118 436 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 COBLL1Q53SF7 1204 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 LLGL2Q6P1M3 1020 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 WDR49Q8IV35 697 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 IL31RAQ8NI17 732 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 RXFP2Q8WXD0 754 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 ABTB1Q969K4 478 aaPredicted RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 MTBPQ96DY7 904 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 MAGEB18Q96M61 343 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 FGD4Q96M96 766 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 HEY2Q9UBP5 337 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 GRID1Q9ULK0 1009 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 USP18Q9UMW8 372 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 FZD1Q9UP38 647 aa7.45□□□□□ -1.22
BEST1-202ENST00000449131 GOLGA4Q13439 2230 aaKnown RBP7.45□□□□□ -1.22
BEST1-202ENST00000449131 A0A087WZ62 844 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 CYP2B6P20813 491 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 ACADSBP45954 432 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 LY6KQ17RY6 165 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 EFHC1Q5JVL4 640 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 GPRC5AQ8NFJ5 357 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 CDC26Q8NHZ8 85 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 ZBTB10Q96DT7 871 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 NSL1Q96IY1 281 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 CPB2Q96IY4 423 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 PAFAH2Q99487 392 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 FDXACB1Q9BRP7 624 aaPredicted RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 TRPV6Q9H1D0 765 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 THEGQ9P2T0 379 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 APOEP02649 317 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 POLBP06746 335 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 UBTFL6P0CB48 400 aaPredicted RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 NQO1P15559 274 aaKnown RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 SPRP35270 261 aaPredicted RBP7.44□□□□□ -1.22
BEST1-202ENST00000449131 CDH8P55286 799 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 KCNJ2P63252 427 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 CDC42EP1Q00587 391 aa7.44□□□□□ -1.22
BEST1-202ENST00000449131 ITGB3BPQ13352 177 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms