RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ANXA6P08133 673 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 KRT15P19012 456 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CST5P28325 142 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CUL1Q13616 776 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 MORC3Q14149 939 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 PPP6R3Q5H9R7 873 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 TMCO4Q5TGY1 634 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 ERAP2Q6P179 960 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CAMKK1Q8N5S9 505 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM3CQ92520 227 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 TSSK1BQ9BXA7 367 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 CENPHQ9H3R5 247 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 SFMBT1Q9UHJ3 866 aa5.91□□□□□ -1.46
CDC42BPA-209ENST00000448940 N4BP2Q86UW6 1770 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 KPNA7A9QM74 516 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 PDXKO00764 312 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLC37A4O43826 429 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 HALP42357 657 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 TFF2Q03403 129 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 LMAN2Q12907 356 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 MAN2A1Q16706 1144 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 AMZ1Q400G9 498 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 ARHGEF26Q96DR7 871 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 TMEM175Q9BSA9 504 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLC29A3Q9BZD2 475 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZNF711Q9Y462 761 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 CALB1P05937 261 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 GUCY2CP25092 1073 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 PSMC1P62191 440 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 SIM1P81133 766 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 HSPH1Q92598 858 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 CNOT6LQ96LI5 555 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 FBXL18Q96ME1 805 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 TSPAN18Q96SJ8 248 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 ARGLU1Q9NWB6 273 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 MTMR6Q9Y217 621 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 ASB3Q9Y575 518 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 TSPAN3O60637 253 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 RHOBTB3O94955 611 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 LUC7L3O95232 432 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 ESRRBO95718 433 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 ATP5C1P36542 298 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 TCEAL5Q5H9L2 206 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 MDH1BQ5I0G3 518 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZNF605Q86T29 641 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 SERINC5Q86VE9 423 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 RUBCNQ92622 972 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 VMP1Q96GC9 406 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 ADAM7Q9H2U9 754 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 VPS28Q9UK41 221 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 GJD2Q9UKL4 321 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 KNL1Q8NG31 2342 aa5.9□□□□□ -1.46
CDC42BPA-209ENST00000448940 H7C0C1 242 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 SYN3O14994 580 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 GNA15P30679 374 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 ATP5OP48047 213 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 NUMBP49757 651 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 GEMIN4P57678 1058 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 NOP14P78316 857 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 FAM102AQ5T9C2 384 aaPredicted RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 GAS2L3Q86XJ1 694 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 LINC00301Q8NCQ3 95 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 CXorf40AQ8TE69 158 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 TXLNGQ9NUQ3 528 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 HACD3Q9P035 362 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 ADAM22Q9P0K1 906 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 KIAA1257Q9ULG3 409 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 BARX2Q9UMQ3 279 aaPredicted RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 BZW2Q9Y6E2 419 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 KCNJ18B7U540 433 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 I3L4J1 428 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 ENPP3O14638 875 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 KIAA0355O15063 1070 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 CREB3O43889 395 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 EPHX1P07099 455 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 NCAM1P13591 858 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 CXCR2P25025 360 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 SERPINB6P35237 376 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 KCNJ12Q14500 433 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 IQCB1Q15051 598 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 EFHC1Q5JVL4 640 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 MANEAQ5SRI9 462 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF658Q5TYW1 1059 aaPredicted RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 SYT2Q8N9I0 419 aaPredicted RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 CLEC4DQ8WXI8 215 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 KRT82Q9NSB4 513 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 SIRPGQ9P1W8 387 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 SCINQ9Y6U3 715 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 PDE2AO00408 941 aaPredicted RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 SCAMP3O14828 347 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 RRP1BQ14684 758 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 EPC2Q52LR7 807 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 TMEM63BQ5T3F8 832 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 ABHD15Q6UXT9 468 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 C12orf76Q8N812 135 aaPredicted RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 AUTS2Q8WXX7 1259 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 ASNSD1Q9NWL6 643 aa5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 AFF4Q9UHB7 1163 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-209ENST00000448940 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-209ENST00000448940 PRR5-ARHGAP8B1AHC4 643 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms