RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 HLTFQ14527 1009 aaKnown RBP eCLIP11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 SOWAHAQ2M3V2 549 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 FAM26DQ5JW98 314 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 CYP4A22Q5TCH4 519 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 LLGL2Q6P1M3 1020 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 CCDC137Q6PK04 289 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 POLNQ7Z5Q5 900 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 XYLT1Q86Y38 959 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 ZDHHC17Q8IUH5 632 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 CCDC50Q8IVM0 306 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 CRYBG2Q8N1P7 616 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 GRK7Q8WTQ7 553 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 LRRN4Q8WUT4 740 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 CASKIN2Q8WXE0 1202 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 SEC14L1Q92503 715 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 PGBD4Q96DM1 585 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 MCRS1Q96EZ8 462 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 PPP1R10Q96QC0 940 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 CPXM1Q96SM3 734 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 NCAPGQ9BPX3 1015 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 MRPL45Q9BRJ2 306 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 SEZ6LQ9BYH1 1024 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 FAM129AQ9BZQ8 928 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 LRRC19Q9H756 370 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 ERVK-5Q9HDB9 667 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 MED4Q9NPJ6 270 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 CYLDQ9NQC7 956 aa11.14□□□□□ -0.63
VIPAS39-203ENST00000448935 GOLGA8SH3BPF8 625 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 TTI1O43156 1089 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 RNF8O76064 485 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 THP07101 528 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 KRT7P08729 469 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 PSMA2P25787 234 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 RPL9P32969 192 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 GNL1P36915 607 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 MRPS25P82663 173 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 CBX1P83916 185 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 ORC1Q13415 861 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 GOLGA7BQ2TAP0 167 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 ZFYVE27Q5T4F4 411 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 ALS2CLQ60I27 953 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 AADACL2Q6P093 401 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 SYDE1Q6ZW31 735 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 LIMS2Q7Z4I7 341 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 ADAT2Q7Z6V5 191 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 MRPL10Q7Z7H8 261 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 CCDC105Q8IYK2 499 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 MREGQ8N565 214 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 PRELID2Q8N945 189 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 LRRC45Q96CN5 670 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 PKNOX2Q96KN3 472 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 ERP44Q9BS26 406 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 UBXN6Q9BZV1 441 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 CXCL16Q9H2A7 254 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 ST7Q9NRC1 585 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 CYTH4Q9UIA0 394 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 HPCAL4Q9UM19 191 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 NFU1Q9UMS0 254 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 PTGESO14684 152 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 PPEF2O14830 753 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 FKTNO75072 461 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 RARAP10276 462 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 WARSP23381 471 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 SOX11P35716 441 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 COILP38432 576 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 AARSP49588 968 aaKnown RBP eCLIP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 SLC8A3P57103 927 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 LILRA4P59901 499 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 LMNB2Q03252 620 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 PPP1R26Q5T8A7 1209 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 FAM43BQ6ZT52 329 aaPredicted RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 CPNE8Q86YQ8 564 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 JAMLQ86YT9 394 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 GSPT2Q8IYD1 628 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 TMEM86AQ8N2M4 240 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 TMEM130Q8N3G9 435 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 GOLGA6L1Q8N7Z2 621 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 ARRDC4Q8NCT1 418 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 UBA3Q8TBC4 463 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 SLCO2A1Q92959 643 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 WNT8BQ93098 351 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 RUFY1Q96T51 708 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 OSBPL8Q9BZF1 889 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 METTL5Q9NRN9 209 aaKnown RBP11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 ASNSD1Q9NWL6 643 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 PADI3Q9ULW8 664 aa11.13□□□□□ -0.63
VIPAS39-203ENST00000448935 GRIN2DO15399 1336 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 ESYT3A0FGR9 886 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 HSF2BPO75031 334 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 TJP3O95049 919 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 GJB6O95452 261 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 ECEL1O95672 775 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 GAS8O95995 478 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 KRT1P04264 644 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 ERBB2P04626 1255 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 PTPN7P35236 360 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 RFC1P35251 1148 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 SCNN1AP37088 669 aa11.12□□□□□ -0.63
VIPAS39-203ENST00000448935 ACADSBP45954 432 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms