RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 SF3A2Q15428 464 aaKnown RBP16.63■□□□□ 0.25
TRA2A-203ENST00000448549 DUOXA2Q1HG44 320 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 C4orf50Q6ZRC1 276 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 DPH6Q7L8W6 267 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 LIMS2Q7Z4I7 341 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 CAMKK1Q8N5S9 505 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 FSIP1Q8NA03 581 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 SH3RF2Q8TEC5 729 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 EZH1Q92800 747 aaPredicted RBP16.63■□□□□ 0.25
TRA2A-203ENST00000448549 MYLPFQ96A32 169 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 HHIPQ96QV1 700 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 SYT15Q9BQS2 421 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 CRTAC1Q9NQ79 661 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 GCNT4Q9P109 453 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 MAGEC2Q9UBF1 373 aaPredicted RBP16.63■□□□□ 0.25
TRA2A-203ENST00000448549 ANK1P16157 1881 aa16.63■□□□□ 0.25
TRA2A-203ENST00000448549 NUP210Q8TEM1 1887 aaPredicted RBP16.63■□□□□ 0.25
TRA2A-203ENST00000448549 PDGFRBP09619 1106 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 HDCP19113 662 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 BDNFP23560 247 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 RAP1GAPP47736 663 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 IFNAR2P48551 515 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 USP4Q13107 963 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 KCNB1Q14721 858 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 SURF1Q15526 300 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 EML3Q32P44 896 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 FBXO43Q4G163 708 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 AASDHQ4L235 1098 aaPredicted RBP16.62■□□□□ 0.25
TRA2A-203ENST00000448549 STXBP4Q6ZWJ1 553 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 RPLP0P6Q8NHW5 317 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 CD101Q93033 1021 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 ATP2A3Q93084 1043 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 EXOC4Q96A65 974 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 LOXL4Q96JB6 756 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 LINC00597Q9H2U6 94 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 ZSCAN16Q9H4T2 348 aaPredicted RBP16.62■□□□□ 0.25
TRA2A-203ENST00000448549 HSPBP1Q9NZL4 362 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 CDH9Q9ULB4 789 aa16.62■□□□□ 0.25
TRA2A-203ENST00000448549 EPN2O95208 641 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 ZNF806P0C7X5 589 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 GRIK1P39086 918 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 NASPP49321 788 aaPredicted RBP16.61■□□□□ 0.25
TRA2A-203ENST00000448549 USP46P62068 366 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 CYP27A1Q02318 531 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 PSMD2Q13200 908 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 STK38Q15208 465 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 VSTM1Q6UX27 236 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 WDR49Q8IV35 697 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 C12orf50Q8NA57 414 aaPredicted RBP16.61■□□□□ 0.25
TRA2A-203ENST00000448549 RDH13Q8NBN7 331 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 INTS4Q96HW7 963 aaKnown RBP16.61■□□□□ 0.25
TRA2A-203ENST00000448549 SPATA17Q96L03 361 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 MMS19Q96T76 1030 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 TNMDQ9H2S6 317 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 RXFP3Q9NSD7 469 aa16.61■□□□□ 0.25
TRA2A-203ENST00000448549 STX6O43752 255 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 AKAP3O75969 853 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 WARSP23381 471 aaKnown RBP16.6■□□□□ 0.25
TRA2A-203ENST00000448549 NR1H3Q13133 447 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 MAPRE1Q15691 268 aaKnown RBP16.6■□□□□ 0.25
TRA2A-203ENST00000448549 E2F4Q16254 413 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 IL31Q6EBC2 164 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 DENND5BQ6ZUT9 1274 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 SYT13Q7L8C5 426 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 TRAPPC11Q7Z392 1133 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 LINC00301Q8NCQ3 95 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 PCED1BQ96HM7 432 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 ZC3H10Q96K80 434 aaKnown RBP16.6■□□□□ 0.25
TRA2A-203ENST00000448549 MRPL45Q9BRJ2 306 aaKnown RBP16.6■□□□□ 0.25
TRA2A-203ENST00000448549 TRIM9Q9C026 710 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 LRRC27Q9C0I9 530 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 SMOC1Q9H4F8 434 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 KIAA1586Q9HCI6 787 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 KBTBD4Q9NVX7 518 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
TRA2A-203ENST00000448549 ARHGAP26Q9UNA1 814 aa16.6■□□□□ 0.25
TRA2A-203ENST00000448549 DCLK1O15075 740 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 CST3P01034 146 aaPredicted RBP16.59■□□□□ 0.25
TRA2A-203ENST00000448549 DLATP10515 647 aaKnown RBP16.59■□□□□ 0.25
TRA2A-203ENST00000448549 ANXA13P27216 316 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 GNL1P36915 607 aaPredicted RBP16.59■□□□□ 0.25
TRA2A-203ENST00000448549 ASIC1P78348 528 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 ZXDBP98169 803 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 DMC1Q14565 340 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 SNRNP35Q16560 246 aaKnown RBP16.59■□□□□ 0.25
TRA2A-203ENST00000448549 PLK5Q496M5 336 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 MDH1BQ5I0G3 518 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 EPM2AIP1Q7L775 607 aaPredicted RBP16.59■□□□□ 0.25
TRA2A-203ENST00000448549 MYCBPAPQ8TBZ2 947 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 ZNF507Q8TCN5 953 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 DHX58Q96C10 678 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 TRPM5Q9NZQ8 1165 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 NME7Q9Y5B8 376 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 SPTBN2O15020 2390 aa16.59■□□□□ 0.25
TRA2A-203ENST00000448549 SPTLC2O15270 562 aa16.58■□□□□ 0.24
TRA2A-203ENST00000448549 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRA2A-203ENST00000448549 TGFB1I1O43294 461 aa16.58■□□□□ 0.24
TRA2A-203ENST00000448549 APBB3O95704 486 aa16.58■□□□□ 0.24
TRA2A-203ENST00000448549 TCF3P15923 654 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms