RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 HAUS5O94927 633 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 KDELR1P24390 212 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 PSMA2P25787 234 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 RFC1P35251 1148 aaPredicted RBP19.99■□□□□ 0.79
SDCBP-204ENST00000447182 ETV4P43268 484 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 HADHQ16836 314 aaKnown RBP19.99■□□□□ 0.79
SDCBP-204ENST00000447182 CYP4A22Q5TCH4 519 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 ANO7Q6IWH7 933 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 ARFGAP1Q8N6T3 406 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 SLC7A3Q8WY07 619 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 FAM167BQ9BTA0 163 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 OSBPL1AQ9BXW6 950 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 MTO1Q9Y2Z2 717 aaKnown RBP19.99■□□□□ 0.79
SDCBP-204ENST00000447182 COL11A1P12107 1806 aaPredicted RBP19.99■□□□□ 0.79
SDCBP-204ENST00000447182 IQANK1A0A1B0GTG1 560 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 FAM189A1O60320 539 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 IL1R2P27930 398 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 NEK3P51956 506 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 MYL6P60660 151 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 DYNLT1P63172 113 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 OVGP1Q12889 678 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 SGSM1Q2NKQ1 1148 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 ZPBP2Q6X784 338 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 LMNTD2Q8IXW0 634 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 TFAP2BQ92481 460 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 PTPRN2Q92932 1015 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 SKA1Q96BD8 255 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 NIFKQ9BYG3 293 aaKnown RBP19.99■□□□□ 0.79
SDCBP-204ENST00000447182 ZNF302Q9NR11 478 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 HEY2Q9UBP5 337 aa19.99■□□□□ 0.79
SDCBP-204ENST00000447182 RLFQ13129 1914 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 TCRBV7S3A2A0A539 114 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 MT-ND3P03897 115 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 POLR2BP30876 1174 aaKnown RBP19.98■□□□□ 0.79
SDCBP-204ENST00000447182 MRPS35P82673 323 aaKnown RBP19.98■□□□□ 0.79
SDCBP-204ENST00000447182 SLC18A2Q05940 514 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 PRKD1Q15139 912 aaPredicted RBP19.98■□□□□ 0.79
SDCBP-204ENST00000447182 TSNAXIP1Q2TAA8 658 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 SEZ6Q53EL9 994 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 SNRNP48Q6IEG0 339 aaKnown RBP19.98■□□□□ 0.79
SDCBP-204ENST00000447182 SH2D5Q6ZV89 423 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 NSL1Q96IY1 281 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 ZWILCHQ9H900 591 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 KCNK13Q9HB14 408 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 ARL8BQ9NVJ2 186 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 STOML1Q9UBI4 398 aa19.98■□□□□ 0.79
SDCBP-204ENST00000447182 XPO7Q9UIA9 1087 aaKnown RBP19.98■□□□□ 0.79
SDCBP-204ENST00000447182 A0A0G2JND7 137 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 GOLGA8RI6L899 631 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 APOC4-APOC2K7ER74 178 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 LPXNO60711 386 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 APOC2P02655 101 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 KRT3P12035 628 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 ARFIP2P53365 341 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 CDK16Q00536 496 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 CBLBQ13191 982 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 KRT72Q14CN4 511 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 BBS9Q3SYG4 887 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 ZNF394Q53GI3 561 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 FAM91A1Q658Y4 838 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 TRIM68Q6AZZ1 485 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 UNC45BQ8IWX7 931 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 APOPT1Q96IL0 206 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 MTMR12Q9C0I1 747 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 LHX5Q9H2C1 402 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 C10orf88Q9H8K7 445 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 H0Y3Z8 333 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 GSC2O15499 205 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 ADCY3O60266 1144 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 APBA3O96018 575 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 PCK1P35558 622 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 PSMC4P43686 418 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 IRX1P78414 480 aaPredicted RBP19.97■□□□□ 0.79
SDCBP-204ENST00000447182 SMTNL2Q2TAL5 461 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 PTPN20Q4JDL3 420 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 KHDC1Q4VXA5 237 aaKnown RBP19.97■□□□□ 0.79
SDCBP-204ENST00000447182 LRRC6Q86X45 466 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 ZNF526Q8TF50 670 aaPredicted RBP19.97■□□□□ 0.79
SDCBP-204ENST00000447182 SLC44A1Q8WWI5 657 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 DNAJC9Q8WXX5 260 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 KLF6Q99612 283 aaPredicted RBP19.97■□□□□ 0.79
SDCBP-204ENST00000447182 C12orf65Q9H3J6 166 aaKnown RBP19.97■□□□□ 0.79
SDCBP-204ENST00000447182 MMADHCQ9H3L0 296 aaPredicted RBP19.97■□□□□ 0.79
SDCBP-204ENST00000447182 ZNF277Q9NRM2 450 aaPredicted RBP19.97■□□□□ 0.79
SDCBP-204ENST00000447182 POLIQ9UNA4 740 aa19.97■□□□□ 0.79
SDCBP-204ENST00000447182 GOLGB1Q14789 3259 aaKnown RBP19.97■□□□□ 0.79
SDCBP-204ENST00000447182 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.96■□□□□ 0.79
SDCBP-204ENST00000447182 SPAG6O75602 509 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 PIAS1O75925 651 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 DLDP09622 509 aaKnown RBP19.96■□□□□ 0.79
SDCBP-204ENST00000447182 LINGO3P0C6S8 592 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 RFC5P40937 340 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 TNFSF9P41273 254 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 YWHAEP62258 255 aaKnown RBP19.96■□□□□ 0.79
SDCBP-204ENST00000447182 SP2Q02086 613 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 DUOXA2Q1HG44 320 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 RFWD3Q6PCD5 774 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 APLFQ8IW19 511 aaPredicted RBP19.96■□□□□ 0.79
SDCBP-204ENST00000447182 KIAA0319LQ8IZA0 1049 aa19.96■□□□□ 0.79
SDCBP-204ENST00000447182 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms