RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 EBF3Q9H4W6 596 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 CYP4F11Q9HBI6 524 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 IGKV6-21A0A0C4DH24 114 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 CNTN5O94779 1100 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 PRAMEF12O95522 483 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 ABCB4P21439 1286 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 NUDT1P36639 197 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 ART1P52961 327 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 C21orf59P57076 290 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 RACK1P63244 317 aaKnown RBP7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 SP4Q02446 784 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 ZNF77Q15935 545 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 ATF7IP2Q5U623 682 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 SDE2Q6IQ49 451 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 PHC2Q8IXK0 858 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 KCTD17Q8N5Z5 321 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 METTL13Q8N6R0 699 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 SMG8Q8ND04 991 aaKnown RBP7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 TTC8Q8TAM2 541 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 ZBTB10Q96DT7 871 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 FBRSQ9HAH7 460 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 MCCC2Q9HCC0 563 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 CYP8B1Q9UNU6 501 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 YIPF1Q9Y548 306 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 ENTPD2Q9Y5L3 495 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 SHANK1Q9Y566 2161 aa7.04□□□□□ -1.28
BRAFP1-201ENST00000445336 NBASA2RRP1 2371 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 RBAK-RBAKDNI3L0D1 243 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 SLC9A3R1O14745 358 aaPredicted RBP7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 LRCH4O75427 683 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 WNT1P04628 370 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 ARSAP15289 507 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 FECHP22830 423 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 NOP2P46087 812 aaKnown RBP7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 SLC45A4Q5BKX6 768 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 CCDC33Q8N5R6 958 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 STK17AQ9UEE5 414 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 EXOC6BQ9Y2D4 811 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 RNF212BA8MTL3 300 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 FANCGO15287 622 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 GPAA1O43292 621 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 PAX3P23760 479 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 MTF1Q14872 753 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 GAB4Q2WGN9 574 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 RBM44Q6ZP01 1051 aaKnown RBP7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 CCDC13Q8IYE1 715 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 SSH1Q8WYL5 1049 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 TDP1Q9NUW8 608 aa7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 DUS2Q9NX74 493 aaKnown RBP7.03□□□□□ -1.28
BRAFP1-201ENST00000445336 A0A1W2PRU2 124 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 OTOL1A6NHN0 477 aaPredicted RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 MEIS3P2A8K0S8 358 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 TNFSF15O95150 251 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 SEC24AO95486 1093 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 CLCN1P35523 988 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 POU5F1BQ06416 359 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 RUNX1T1Q06455 604 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 NCBP1Q09161 790 aaKnown RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 IQCHQ86VS3 1027 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 PHTF2Q8N3S3 785 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 EID2Q8N6I1 236 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 ACBD4Q8NC06 268 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 IPO4Q8TEX9 1081 aaKnown RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 SPOCK3Q9BQ16 436 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 C10orf142B7Z368 130 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 PRSS44E7EML9 344 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 FAM160A1Q05DH4 1040 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 ZNF630Q2M218 657 aaPredicted RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 DHX32Q7L7V1 743 aaKnown RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 IFNLR1Q8IU57 520 aaPredicted RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 CLASRPQ8N2M8 674 aaKnown RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 RRP36Q96EU6 259 aaKnown RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 B3GALT6Q96L58 329 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 ACE2Q9BYF1 805 aaPredicted RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 RTEL1Q9NZ71 1219 aa7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 CIZ1Q9ULV3 898 aaPredicted RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 ZNF638Q14966 1978 aaKnown RBP7.02□□□□□ -1.29
BRAFP1-201ENST00000445336 A0A1W2PQF6 199 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 MKRN2OSH3BPM6 223 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 ASAP2O43150 1006 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 RANBP6O60518 1105 aaKnown RBP7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 RECKO95980 971 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 HOXB2P14652 356 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 SLC5A2P31639 672 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 SCNN1GP51170 649 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 CLCN3P51790 818 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 OVGP1Q12889 678 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 BNC2Q6ZN30 1099 aaPredicted RBP7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 MON1AQ86VX9 555 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 FCHSD1Q86WN1 690 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 AHI1Q8N157 1196 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 TREX2Q9BQ50 279 aaPredicted RBP7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 EDARQ9UNE0 448 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 ZFC3H1O60293 1989 aaKnown RBP7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 PNMA6FA0A0J9YX94 578 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 EFCAB7A8K855 629 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 SFI1A8K8P3 1242 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 KAT7O95251 611 aa7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 P4HBP07237 508 aaKnown RBP7.01□□□□□ -1.29
BRAFP1-201ENST00000445336 SLC6A11P48066 632 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms