RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 C4orf50Q6ZRC1 276 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 STKLD1Q8NE28 680 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 TTC16Q8NEE8 873 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 SPATA18Q8TC71 538 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 FAM3CQ92520 227 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 MRPS31Q92665 395 aaKnown RBP9.36□□□□□ -0.91
USP6NL-203ENST00000443016 ABCB6Q9NP58 842 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 RPS6KL1Q9Y6S9 549 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 MYBPHLA2RUH7 354 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 HCRTO43612 131 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 CST3P01034 146 aaPredicted RBP9.36□□□□□ -0.91
USP6NL-203ENST00000443016 SERPINB4P48594 390 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 GPR15P49685 360 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 PSMC1P62191 440 aaKnown RBP9.36□□□□□ -0.91
USP6NL-203ENST00000443016 CYP27A1Q02318 531 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 PNOCQ13519 176 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 MAPRE1Q15691 268 aaKnown RBP9.36□□□□□ -0.91
USP6NL-203ENST00000443016 KMT5BQ4FZB7 885 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 RBM43Q6ZSC3 357 aaKnown RBP9.36□□□□□ -0.91
USP6NL-203ENST00000443016 ASCL5Q7RTU5 278 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 OSTM1Q86WC4 334 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 MAB21L3Q8N8X9 362 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 CGRRF1Q99675 332 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 SYT15Q9BQS2 421 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 SNX25Q9H3E2 840 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 TRPV5Q9NQA5 729 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 THG1LQ9NWX6 298 aaKnown RBP9.36□□□□□ -0.91
USP6NL-203ENST00000443016 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 UXTQ9UBK9 157 aaPredicted RBP9.36□□□□□ -0.91
USP6NL-203ENST00000443016 ZMYM5Q9UJ78 669 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 R4GN57 208 aa9.36□□□□□ -0.91
USP6NL-203ENST00000443016 GPR179Q6PRD1 2367 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 SYCE3A1L190 88 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 PRR23AA6NEV1 266 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 SLC38A8A6NNN8 435 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 GABRDO14764 452 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 CHADO15335 359 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 KIF20AO95235 890 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 CCDC192P0DO97 292 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 CCNE1P24864 410 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 LMO2P25791 158 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 MAGEA9P43362 315 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 FCHO2Q0JRZ9 810 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 CCDC142Q17RM4 750 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 CFAP221Q4G0U5 840 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 ARHGAP29Q52LW3 1261 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 CMTM8Q8IZV2 173 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 TRIML1Q8N9V2 468 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 OR6B3Q8NGW1 331 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 TTC8Q8TAM2 541 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 BPIFB1Q8TDL5 484 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 RSPRY1Q96DX4 576 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 FUBP3Q96I24 572 aaKnown RBP eCLIP9.35□□□□□ -0.91
USP6NL-203ENST00000443016 ZFYVE19Q96K21 471 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 GSDMAQ96QA5 445 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 SLC46A2Q9BY10 475 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 SMG9Q9H0W8 520 aaKnown RBP9.35□□□□□ -0.91
USP6NL-203ENST00000443016 IL21Q9HBE4 155 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 MAGEC2Q9UBF1 373 aaPredicted RBP9.35□□□□□ -0.91
USP6NL-203ENST00000443016 NXF1Q9UBU9 619 aaKnown RBP9.35□□□□□ -0.91
USP6NL-203ENST00000443016 CDH9Q9ULB4 789 aa9.35□□□□□ -0.91
USP6NL-203ENST00000443016 ATP2C2O75185 946 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 PRAMEF12O95522 483 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 GNL1P36915 607 aaPredicted RBP9.34□□□□□ -0.91
USP6NL-203ENST00000443016 GRIK1P39086 918 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 CASP4P49662 377 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 NLRP12P59046 1061 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 DPYDQ12882 1025 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 TXNDC8Q6A555 127 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 CC2D1AQ6P1N0 951 aaPredicted RBP9.34□□□□□ -0.91
USP6NL-203ENST00000443016 C12orf56Q8IXR9 622 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 CELF5Q8N6W0 485 aaKnown RBP9.34□□□□□ -0.91
USP6NL-203ENST00000443016 KIAA0895Q8NCT3 520 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 MKNK1Q9BUB5 465 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 TRPC7Q9HCX4 862 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 GTSE1Q9NYZ3 720 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 TSC2P49815 1807 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 KLRC4O43908 158 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 RPN1P04843 607 aaKnown RBP9.34□□□□□ -0.91
USP6NL-203ENST00000443016 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 SP9P0CG40 484 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 HMGA1P17096 107 aaKnown RBP9.34□□□□□ -0.91
USP6NL-203ENST00000443016 ANXA13P27216 316 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 RPS9P46781 194 aaKnown RBP9.34□□□□□ -0.91
USP6NL-203ENST00000443016 MYL6P60660 151 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 CSTF1Q05048 431 aaKnown RBP9.34□□□□□ -0.91
USP6NL-203ENST00000443016 STX1AQ16623 288 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 CEP135Q66GS9 1140 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 C1orf228Q6PIY5 440 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 KBTBD7Q8WVZ9 684 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 MYLPFQ96A32 169 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 HINFPQ9BQA5 517 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 SEMA4AQ9H3S1 761 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 OBP2AQ9NY56 170 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 FRMD4BQ9Y2L6 1034 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 PCDHA5Q9Y5H7 936 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 NCANO14594 1321 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 COL4A3Q01955 1670 aa9.34□□□□□ -0.91
USP6NL-203ENST00000443016 A8MXQ7 604 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms