RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 KRT82Q9NSB4 513 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 LNPEPQ9UIQ6 1025 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 USP1O94782 785 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 NPTXRO95502 500 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 KITP10721 976 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 ARL4CP56559 192 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 KRT76Q01546 638 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 CUL2Q13617 745 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 SPOCD1Q6ZMY3 1216 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 CYTH2Q99418 400 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 NMUR2Q9GZQ4 415 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 PXMP2Q9NR77 195 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 CHMP2BQ9UQN3 213 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 PCDHA10Q9Y5I2 948 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 CCDC195A0A1B0GUA6 201 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 C4BPAP04003 597 aaKnown RBP14.79□□□□□ -0.04
MCF2L-218ENST00000442625 MYL2P10916 166 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 ESRRAP11474 423 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-218ENST00000442625 PTP4A2Q12974 167 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 MTERF2Q49AM1 385 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 CYP4A22Q5TCH4 519 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 ZNF677Q86XU0 584 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 CACTIN-AS1Q8N1I8 211 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 FEZF2Q8TBJ5 459 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 TMEM143Q96AN5 459 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 FAM161BQ96MY7 647 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 TTC25Q96NG3 672 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 NTPCRQ9BSD7 190 aaKnown RBP14.79□□□□□ -0.04
MCF2L-218ENST00000442625 TRIM55Q9BYV6 548 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 ZWILCHQ9H900 591 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 MRPL47Q9HD33 250 aaKnown RBP14.79□□□□□ -0.04
MCF2L-218ENST00000442625 MARCOQ9UEW3 520 aaPredicted RBP14.79□□□□□ -0.04
MCF2L-218ENST00000442625 RIPK3Q9Y572 518 aa14.79□□□□□ -0.04
MCF2L-218ENST00000442625 MYH9P35579 1960 aaKnown RBP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 ENO1P06733 434 aaKnown RBP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 SFNP31947 248 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 MCCD1P59942 119 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 SLC34A1Q06495 639 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 LBRQ14739 615 aaKnown RBP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 SPDYE2Q495Y8 402 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 EFHC2Q5JST6 749 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 PLEKHA7Q6IQ23 1121 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 RSBN1LQ6PCB5 846 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 SAMD3Q8N6K7 520 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 OR5B17Q8NGF7 314 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 ANKRD27Q96NW4 1050 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 UTP6Q9NYH9 597 aaKnown RBP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 LOXHD1Q8IVV2 1947 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 H3BRJ5 948 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 EXTL3O43909 919 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 ZC3H11AO75152 810 aaKnown RBP eCLIP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 TMEM63AO94886 807 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 ASNSP08243 561 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 BPIFB4P59827 614 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 BAATQ14032 418 aaPredicted RBP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 OASLQ15646 514 aaKnown RBP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 CCDC142Q17RM4 750 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 IRGCQ6NXR0 463 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 BANPQ8N9N5 519 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 SNRNP27Q8WVK2 155 aaKnown RBP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 CPT1BQ92523 772 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 STMN2Q93045 179 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 PLEKHG4BQ96PX9 1271 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 SENP7Q9BQF6 1050 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 SLC38A10Q9HBR0 1119 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 SAR1AQ9NR31 198 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 WDR35Q9P2L0 1181 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 SCOCQ9UIL1 159 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 AGO2Q9UKV8 859 aaKnown RBP14.78□□□□□ -0.04
MCF2L-218ENST00000442625 LRCH1Q9Y2L9 728 aa14.78□□□□□ -0.04
MCF2L-218ENST00000442625 FCHO1O14526 889 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 LPXNO60711 386 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 AVILO75366 819 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 TJP3O95049 919 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 ZWINTO95229 277 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 ITGBL1O95965 494 aaPredicted RBP14.77□□□□□ -0.04
MCF2L-218ENST00000442625 PYGBP11216 843 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 GARTP22102 1010 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 SERPINB4P48594 390 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 VCPP55072 806 aaKnown RBP14.77□□□□□ -0.04
MCF2L-218ENST00000442625 KDSRQ06136 332 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 MORF4L2Q15014 288 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 LRRC36Q1X8D7 754 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 TREML1Q86YW5 311 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 CCDC60Q8IWA6 550 aaPredicted RBP14.77□□□□□ -0.04
MCF2L-218ENST00000442625 MZB1Q8WU39 189 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 LRRN4Q8WUT4 740 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 DCAKDQ8WVC6 231 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 ARHGEF4Q9NR80 690 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 TJP2Q9UDY2 1190 aa14.77□□□□□ -0.04
MCF2L-218ENST00000442625 CTDP1Q9Y5B0 961 aaPredicted RBP14.77□□□□□ -0.04
MCF2L-218ENST00000442625 COL2A1P02458 1487 aaPredicted RBP14.77□□□□□ -0.04
MCF2L-218ENST00000442625 B2RBV5 119 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 STBD1O95210 358 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 BAG2O95816 211 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 CD48P09326 243 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 DLDP09622 509 aaKnown RBP14.77□□□□□ -0.05
MCF2L-218ENST00000442625 PGM1P36871 562 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 PRKCEQ02156 737 aa14.77□□□□□ -0.05
MCF2L-218ENST00000442625 FAAP100Q0VG06 881 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms