RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 F11P03951 625 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 PRKCSHP14314 528 aaPredicted RBP13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 PFKLP17858 780 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 FCARP24071 287 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 GRIK1P39086 918 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 PPP3CCP48454 512 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 NLRP12P59046 1061 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 DDR2Q16832 855 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 DCAF17Q5H9S7 520 aaPredicted RBP13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 SCARA5Q6ZMJ2 495 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 MRPS31Q92665 395 aaKnown RBP13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 DNASE1L2Q92874 299 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 SHDQ96IW2 340 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 PRRX2Q99811 253 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 NT5C1AQ9BXI3 368 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 SDCBP2Q9H190 292 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 MMRN2Q9H8L6 949 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 TRPV5Q9NQA5 729 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 DACH1Q9UI36 760 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 MYO16Q9Y6X6 1858 aa13.35□□□□□ -0.27
CDCA4P3-201ENST00000442572 ZDBF2Q9HCK1 2354 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 CILPO75339 1184 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 RTN3O95197 1032 aaPredicted RBP13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 CCDC192P0DO97 292 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 GJA1P17302 382 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 PSMC3P17980 439 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 FMO5P49326 533 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 CLCN5P51795 746 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 NDST1P52848 882 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 YWHAEP62258 255 aaKnown RBP13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 CBWD6Q4V339 395 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 CBWD3Q5JTY5 395 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 CBWD5Q5RIA9 395 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 GPR158Q5T848 1215 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 TANGO2Q6ICL3 276 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 SPOPLQ6IQ16 392 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 PHLDB3Q6NSJ2 640 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 DENND5BQ6ZUT9 1274 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 MFSD6LQ8IWD5 586 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 TRIM59Q8IWR1 403 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 IRF7Q92985 503 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 SMARCD1Q96GM5 515 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 KXD1Q9BQD3 176 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 TTLL2Q9BWV7 592 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 B3GNT5Q9BYG0 378 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 MFSD1Q9H3U5 465 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 DPEP3Q9H4B8 488 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 APOBEC3GQ9HC16 384 aaKnown RBP13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 COMMD8Q9NX08 183 aa13.34□□□□□ -0.27
CDCA4P3-201ENST00000442572 NARSO43776 548 aaKnown RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 COL9A1P20849 921 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 TBXAS1P24557 533 aaPredicted RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 ERCC5P28715 1186 aaPredicted RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 RAP1GAPP47736 663 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 GPR15P49685 360 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 PDE6CP51160 858 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 MLLT6P55198 1093 aaPredicted RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 GPC5P78333 572 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 PRKCQQ04759 706 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 ZNF268Q14587 947 aaPredicted RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 CCDC142Q17RM4 750 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 SMYD5Q6GMV2 418 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 POTEHQ6S545 545 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 TMEM150AQ86TG1 271 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 ACOT1Q86TX2 421 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 MON1AQ86VX9 555 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 ARID3BQ8IVW6 561 aaPredicted RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 CMTM8Q8IZV2 173 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 GPR152Q8TDT2 470 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 OVCA2Q8WZ82 227 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 SEMA4DQ92854 862 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 ZSWIM3Q96MP5 696 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 RPP25Q9BUL9 199 aaKnown RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 TRMT61BQ9BVS5 477 aaKnown RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 SRRTQ9BXP5 876 aaKnown RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 SMOC2Q9H3U7 446 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 DMAP1Q9NPF5 467 aaPredicted RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 ARHGEF3Q9NR81 526 aa13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 MAGED2Q9UNF1 606 aaPredicted RBP13.33□□□□□ -0.28
CDCA4P3-201ENST00000442572 F8VP50 259 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 NRG2O14511 850 aaPredicted RBP13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 DPYSL4O14531 572 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 MBD3O95983 291 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 CFHP08603 1231 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 AVPR1AP37288 418 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 STX17P56962 302 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 FCHO2Q0JRZ9 810 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 ARHGAP29Q52LW3 1261 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 VITQ6UXI7 678 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 FAM35AQ86V20 835 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 FUKQ8N0W3 1084 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 SIX5Q8N196 739 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 NUP93Q8N1F7 819 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 CELF5Q8N6W0 485 aaKnown RBP13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 PDZD8Q8NEN9 1154 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 SLITRK1Q96PX8 696 aa13.32□□□□□ -0.28
CDCA4P3-201ENST00000442572 HNRNPABQ99729 332 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms