RNA–Protein interactions for RNA: ENST00000441114.5

SHH-204, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-204ENST00000441114 FAXDC2Q96IV6 333 aa19.83■□□□□ 0.77
SHH-204ENST00000441114 CRACR2AQ9BSW2 395 aa19.83■□□□□ 0.77
SHH-204ENST00000441114 RPP25Q9BUL9 199 aaKnown RBP19.83■□□□□ 0.77
SHH-204ENST00000441114 DNAI2Q9GZS0 605 aa19.83■□□□□ 0.77
SHH-204ENST00000441114 IL21Q9HBE4 155 aa19.83■□□□□ 0.77
SHH-204ENST00000441114 GDE1Q9NZC3 331 aa19.83■□□□□ 0.77
SHH-204ENST00000441114 IGSF9Q9P2J2 1179 aa19.83■□□□□ 0.77
SHH-204ENST00000441114 NFE2L3Q9Y4A8 694 aa19.83■□□□□ 0.77
SHH-204ENST00000441114 OBSL1O75147 1896 aa19.83■□□□□ 0.76
SHH-204ENST00000441114 NCOR1O75376 2440 aa19.83■□□□□ 0.76
SHH-204ENST00000441114 TTC28Q96AY4 2481 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 FAM86C2PA6NEL3 165 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 AP1G2O75843 785 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 MICAL2O94851 1124 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 FGF19O95750 216 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 PRKCSHP14314 528 aaPredicted RBP19.82■□□□□ 0.76
SHH-204ENST00000441114 TYRO3Q06418 890 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 IFRD2Q12894 506 aaPredicted RBP19.82■□□□□ 0.76
SHH-204ENST00000441114 TDGQ13569 410 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 HTR4Q13639 388 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 ARHGAP15Q53QZ3 475 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 GPR158Q5T848 1215 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 MTSS1LQ765P7 747 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 RRAGAQ7L523 313 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 FUKQ8N0W3 1084 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 LMO3Q8TAP4 145 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 ENOX1Q8TC92 643 aaKnown RBP19.82■□□□□ 0.76
SHH-204ENST00000441114 HEXIM2Q96MH2 286 aaKnown RBP19.82■□□□□ 0.76
SHH-204ENST00000441114 KCNK16Q96T55 309 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 KXD1Q9BQD3 176 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 INTS2Q9H0H0 1204 aaKnown RBP19.82■□□□□ 0.76
SHH-204ENST00000441114 TMEM30AQ9NV96 361 aa19.82■□□□□ 0.76
SHH-204ENST00000441114 ZNF638Q14966 1978 aaKnown RBP19.82■□□□□ 0.76
SHH-204ENST00000441114 KCNJ18B7U540 433 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 ANHXE9PGG2 379 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 PES1O00541 588 aaKnown RBP19.81■□□□□ 0.76
SHH-204ENST00000441114 NOL4O94818 638 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 CDC25CP30307 473 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 YWHAEP62258 255 aaKnown RBP19.81■□□□□ 0.76
SHH-204ENST00000441114 KCNJ12Q14500 433 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 MAN2A1Q16706 1144 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 FAM78AQ5JUQ0 283 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 ARHGEF19Q8IW93 802 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 SLC44A3Q8N4M1 653 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 TTC39CQ8N584 583 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 EDAQ92838 391 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 KAT5Q92993 513 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 CYFIP2Q96F07 1278 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 SMARCD1Q96GM5 515 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 TMEM176AQ96HP8 235 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 SPATA17Q96L03 361 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 C8orf48Q96LL4 319 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 TUBGCP2Q9BSJ2 902 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 KRT82Q9NSB4 513 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 GCNT4Q9P109 453 aa19.81■□□□□ 0.76
SHH-204ENST00000441114 NARSO43776 548 aaKnown RBP19.8■□□□□ 0.76
SHH-204ENST00000441114 F11P03951 625 aa19.8■□□□□ 0.76
SHH-204ENST00000441114 PTMSP20962 102 aa19.8■□□□□ 0.76
SHH-204ENST00000441114 TBXAS1P24557 533 aaPredicted RBP19.8■□□□□ 0.76
SHH-204ENST00000441114 RAD23BP54727 409 aa19.8■□□□□ 0.76
SHH-204ENST00000441114 USP46P62068 366 aa19.8■□□□□ 0.76
SHH-204ENST00000441114 KLHL40Q2TBA0 621 aa19.8■□□□□ 0.76
SHH-204ENST00000441114 TANGO2Q6ICL3 276 aa19.8■□□□□ 0.76
SHH-204ENST00000441114 DENND5BQ6ZUT9 1274 aa19.8■□□□□ 0.76
SHH-204ENST00000441114 SLC4A11Q8NBS3 891 aa19.8■□□□□ 0.76
SHH-204ENST00000441114 ZSCAN18Q8TBC5 510 aaPredicted RBP19.8■□□□□ 0.76
SHH-204ENST00000441114 NXPE3Q969Y0 559 aa19.8■□□□□ 0.76
SHH-204ENST00000441114 UXTQ9UBK9 157 aaPredicted RBP19.8■□□□□ 0.76
SHH-204ENST00000441114 PCDHB4Q9Y5E5 795 aa19.8■□□□□ 0.76
SHH-204ENST00000441114 BEST1O76090 585 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 SLC9A1P19634 815 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 MAP3K7CLP57077 242 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 ANO6Q4KMQ2 910 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 VWA3BQ502W6 1294 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 PPP1R26Q5T8A7 1209 aaPredicted RBP19.79■□□□□ 0.76
SHH-204ENST00000441114 GBP6Q6ZN66 633 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 TMEM150AQ86TG1 271 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 JAKMIP2Q96AA8 810 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 ASB16Q96NS5 453 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 HNRNPABQ99729 332 aaKnown RBP19.79■□□□□ 0.76
SHH-204ENST00000441114 PLA2G2FQ9BZM2 168 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 GPR88Q9GZN0 384 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 DMAP1Q9NPF5 467 aaPredicted RBP19.79■□□□□ 0.76
SHH-204ENST00000441114 FANCLQ9NW38 375 aa19.79■□□□□ 0.76
SHH-204ENST00000441114 FAM200BP0CF97 657 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 CD19P15391 556 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 VIPR2P41587 438 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 TCP11X2Q5H9J9 407 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 PHLDB3Q6NSJ2 640 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 TMEM270Q6UE05 265 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 TRIM67Q6ZTA4 783 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 UBALD2Q8IYN6 164 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 NUP93Q8N1F7 819 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 MAB21L3Q8N8X9 362 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 MRPS31Q92665 395 aaKnown RBP19.78■□□□□ 0.76
SHH-204ENST00000441114 SMARCD2Q92925 531 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 TRMT2BQ96GJ1 504 aaKnown RBP19.78■□□□□ 0.76
SHH-204ENST00000441114 MYRFLQ96LU7 910 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 SMOQ99835 787 aa19.78■□□□□ 0.76
SHH-204ENST00000441114 NDST4Q9H3R1 872 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms