RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 E5RJQ4 531 aa29.5■■■□□ 2.31
CGREF1-207ENST00000440612 RIOK3O14730 519 aaKnown RBP29.5■■■□□ 2.31
CGREF1-207ENST00000440612 RPL7AP62424 266 aaKnown RBP29.5■■■□□ 2.31
CGREF1-207ENST00000440612 ZNF268Q14587 947 aaPredicted RBP29.5■■■□□ 2.31
CGREF1-207ENST00000440612 PTPROQ16827 1216 aa29.5■■■□□ 2.31
CGREF1-207ENST00000440612 TMEM240Q5SV17 173 aa29.5■■■□□ 2.31
CGREF1-207ENST00000440612 FAM171A1Q5VUB5 890 aa29.5■■■□□ 2.31
CGREF1-207ENST00000440612 FEZF2Q8TBJ5 459 aa29.5■■■□□ 2.31
CGREF1-207ENST00000440612 SRGAP2O75044 1071 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 FGBP02675 491 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 PLA2G4AP47712 749 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 MESDQ14696 234 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 VARS2Q5ST30 1063 aaKnown RBP29.49■■■□□ 2.31
CGREF1-207ENST00000440612 CLEC20AQ6ZU45 233 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 FAM35AQ86V20 835 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 CMTR2Q8IYT2 770 aaKnown RBP29.49■■■□□ 2.31
CGREF1-207ENST00000440612 THEM5Q8N1Q8 247 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 B3GALT6Q96L58 329 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 VN1R3Q9BXE9 311 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 CDC23Q9UJX2 597 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 SAR1BQ9Y6B6 198 aa29.49■■■□□ 2.31
CGREF1-207ENST00000440612 SF3B1O75533 1304 aaKnown RBP eCLIP29.48■■■□□ 2.31
CGREF1-207ENST00000440612 PRLRP16471 622 aa29.48■■■□□ 2.31
CGREF1-207ENST00000440612 CACNA2D1P54289 1103 aa29.48■■■□□ 2.31
CGREF1-207ENST00000440612 DNAJC24Q6P3W2 148 aa29.48■■■□□ 2.31
CGREF1-207ENST00000440612 TAS1R1Q7RTX1 841 aa29.48■■■□□ 2.31
CGREF1-207ENST00000440612 RNF168Q8IYW5 571 aaPredicted RBP29.48■■■□□ 2.31
CGREF1-207ENST00000440612 MYLPFQ96A32 169 aa29.48■■■□□ 2.31
CGREF1-207ENST00000440612 HES6Q96HZ4 224 aa29.48■■■□□ 2.31
CGREF1-207ENST00000440612 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.48■■■□□ 2.31
CGREF1-207ENST00000440612 ST7Q9NRC1 585 aa29.48■■■□□ 2.31
CGREF1-207ENST00000440612 CXXC1Q9P0U4 656 aaPredicted RBP29.48■■■□□ 2.31
CGREF1-207ENST00000440612 WDR35Q9P2L0 1181 aa29.48■■■□□ 2.31
CGREF1-207ENST00000440612 PIK3R2O00459 728 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 XPO1O14980 1071 aaKnown RBP29.47■■■□□ 2.31
CGREF1-207ENST00000440612 NPR3P17342 541 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 ZNF252P-AS1Q0IIN9 211 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 PEX26Q7Z412 305 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 MSANTD4Q8NCY6 345 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 PIWIL1Q96J94 861 aaKnown RBP29.47■■■□□ 2.31
CGREF1-207ENST00000440612 SIGLEC16A6NMB1 481 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 CAPN15O75808 1086 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 SYN1P17600 705 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 OGDHQ02218 1023 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 FAM183BPQ6ZVS7 135 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 ZMIZ2Q8NF64 920 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 CD101Q93033 1021 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 SMOQ99835 787 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 ZCWPW1Q9H0M4 648 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 SYNCQ9H7C4 482 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 KRT82Q9NSB4 513 aa29.47■■■□□ 2.31
CGREF1-207ENST00000440612 MRPL42Q9Y6G3 142 aaKnown RBP29.47■■■□□ 2.31
CGREF1-207ENST00000440612 PAPSS1O43252 624 aaPredicted RBP29.46■■■□□ 2.31
CGREF1-207ENST00000440612 TBC1D4O60343 1298 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 COMTP21964 271 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 ALDH7A1P49419 539 aaKnown RBP29.46■■■□□ 2.31
CGREF1-207ENST00000440612 RTP2Q5QGT7 225 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 PIGZQ86VD9 579 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 JOSD2Q8TAC2 188 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 IPO4Q8TEX9 1081 aaKnown RBP29.46■■■□□ 2.31
CGREF1-207ENST00000440612 COG1Q8WTW3 980 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 IGSF21Q96ID5 467 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 HSFY1Q96LI6 401 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 MCEEQ96PE7 176 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 OSBPL9Q96SU4 736 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 RHOBTB2Q9BYZ6 727 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 CYLDQ9NQC7 956 aa29.46■■■□□ 2.31
CGREF1-207ENST00000440612 TMEM110-MUSTN1A8MSY1 372 aa29.45■■■□□ 2.31
CGREF1-207ENST00000440612 GOLGA8SH3BPF8 625 aa29.45■■■□□ 2.31
CGREF1-207ENST00000440612 KCNT2Q6UVM3 1135 aa29.45■■■□□ 2.31
CGREF1-207ENST00000440612 OLFML1Q6UWY5 402 aa29.45■■■□□ 2.31
CGREF1-207ENST00000440612 KHSRPQ92945 711 aaKnown RBP eCLIP29.45■■■□□ 2.31
CGREF1-207ENST00000440612 MED10Q9BTT4 135 aa29.45■■■□□ 2.31
CGREF1-207ENST00000440612 CSNK1G1Q9HCP0 422 aa29.45■■■□□ 2.31
CGREF1-207ENST00000440612 AMFRQ9UKV5 643 aa29.45■■■□□ 2.31
CGREF1-207ENST00000440612 MYO1FO00160 1098 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 ZNF185O15231 689 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 DDX3YO15523 660 aaKnown RBP29.44■■■□□ 2.3
CGREF1-207ENST00000440612 PROSCO94903 275 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 GJB5O95377 273 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 OR4Q2P0C623 313 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 FAM200BP0CF97 657 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 RFC1P35251 1148 aaPredicted RBP29.44■■■□□ 2.3
CGREF1-207ENST00000440612 HTRA4P83105 476 aaPredicted RBP29.44■■■□□ 2.3
CGREF1-207ENST00000440612 ELAVL2Q12926 359 aaKnown RBP29.44■■■□□ 2.3
CGREF1-207ENST00000440612 TUBB2AQ13885 445 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 BTG3Q14201 252 aaPredicted RBP29.44■■■□□ 2.3
CGREF1-207ENST00000440612 RPS6KA1Q15418 735 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 PSMB7Q99436 277 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 TUBB2BQ9BVA1 445 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 NLRC5Q86WI3 1866 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 LINC00271P0C7V0 271 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 KRT3P12035 628 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 CXCR5P32302 372 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 TSPY1Q01534 308 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 TAP1Q03518 808 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 PSRC1Q6PGN9 363 aaPredicted RBP29.44■■■□□ 2.3
CGREF1-207ENST00000440612 CEP57Q86XR8 500 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 SCUBE3Q8IX30 993 aa29.44■■■□□ 2.3
CGREF1-207ENST00000440612 SLC39A11Q8N1S5 342 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms