RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 RTN2O75298 545 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CST3P01034 146 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SPATA31D3P0C874 917 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ABCB4P21439 1286 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 NDUFV1P49821 464 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TUBB4BP68371 445 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 KCNC3Q14003 757 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ELF2Q15723 593 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SGSM1Q2NKQ1 1148 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SV2CQ496J9 727 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SPATA31D4Q6ZUB0 917 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SLC47A2Q86VL8 602 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ZNF677Q86XU0 584 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 PALB2Q86YC2 1186 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SYCE1Q8N0S2 351 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 LRRN4CLQ8ND94 238 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 RFFLQ8WZ73 363 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TAF4BQ92750 862 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CALR3Q96L12 384 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ZNF560Q96MR9 790 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CDCA3Q99618 268 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 APOL5Q9BWW9 433 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 MTRRQ9UBK8 725 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SALL4Q9UJQ4 1053 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SNX12Q9UMY4 172 aa15.44■□□□□ 0.06
TNFRSF1A-204ENST00000440083 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ASS1P00966 412 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 MMEP08473 750 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ODC1P11926 461 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CLCN4P51793 760 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 MYL6P60660 151 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 WSCD1Q658N2 575 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 RHOT2Q8IXI1 618 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 LRRC52Q8N7C0 313 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 OLIG1Q8TAK6 271 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 HLA-CQ95604 372 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 HPDLQ96IR7 371 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ARID3AQ99856 593 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 APOBEC3GQ9HC16 384 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 FNIP2Q9P278 1114 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 THEGQ9P2T0 379 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SSX2IPQ9Y2D8 614 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CDY1Q9Y6F8 540 aa15.43■□□□□ 0.06
TNFRSF1A-204ENST00000440083 GRID2IPA4D2P6 1211 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 KPNA7A9QM74 516 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TGM5O43548 720 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 HCRTO43612 131 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TBC1D4O60343 1298 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ADH1AP07327 375 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 GZMAP12544 262 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 PRLRP16471 622 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CHRNB2P17787 502 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 OR1D2P34982 312 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CDR1P51861 262 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ARPP19P56211 112 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 FMO1Q01740 532 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 MRPL58Q14197 206 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CTXN3Q4LDR2 81 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CCDC181Q5TID7 509 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SMYD5Q6GMV2 418 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TMEM270Q6UE05 265 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TRIM72Q6ZMU5 477 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ANKS3Q6ZW76 656 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 DNAAF5Q86Y56 855 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 GPR65Q8IYL9 337 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 C12orf76Q8N812 135 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 RBBP8NLQ8NC74 664 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 APPL2Q8NEU8 664 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 RPGRIP1Q96KN7 1286 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CAPZA3Q96KX2 299 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TMEM209Q96SK2 561 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 RTP3Q9BQQ7 232 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 XYLT2Q9H1B5 865 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CDH22Q9UJ99 828 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 L1RE1Q9UN81 338 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SNX9Q9Y5X1 595 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 BACE2Q9Y5Z0 518 aa15.42■□□□□ 0.06
TNFRSF1A-204ENST00000440083 NCK2O43639 380 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 FTCDO95954 541 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 GLUD1P00367 558 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 FTLP02792 175 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 OR4Q2P0C623 313 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 P4HA1P13674 534 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 TYMPP19971 482 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 GNA15P30679 374 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 PNPLA4P41247 253 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 KCNQ1P51787 676 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 GPC5P78333 572 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ROR1Q01973 937 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 CREMQ03060 361 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 YWHAHQ04917 246 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ERCC6LQ2NKX8 1250 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ZNF667Q5HYK9 610 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 OVOS1Q6IE37 1185 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ZNF280DQ6N043 979 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 PPP1R2P3Q6NXS1 205 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 ANKRD54Q6NXT1 300 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 SYCE2Q6PIF2 218 aa15.41■□□□□ 0.06
TNFRSF1A-204ENST00000440083 OSTM1Q86WC4 334 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms