RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 KRT31Q15323 416 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 EXOC3L4Q17RC7 722 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 PHLDB3Q6NSJ2 640 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 RNF135Q8IUD6 432 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 ZDHHC14Q8IZN3 488 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 FUKQ8N0W3 1084 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 PLCD3Q8N3E9 789 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 SLC4A11Q8NBS3 891 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 SLC2A14Q8TDB8 520 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 FGF13Q92913 245 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 TMEM176AQ96HP8 235 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 HEXIM2Q96MH2 286 aaKnown RBP20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 BPIFA3Q9BQP9 254 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 VPS16Q9H269 839 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 HSD3B7Q9H2F3 369 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 FAM124BQ9H5Z6 455 aaPredicted RBP20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 TMEM30AQ9NV96 361 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 LIMD1Q9UGP4 676 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 CDH7Q9ULB5 785 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 ATP8B3O60423 1300 aa20.69■□□□□ 0.9
SEMA3B-206ENST00000439487 GTPBP10A4D1E9 387 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 F8VP50 259 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 TRIM66O15016 1216 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 CSH1P0DML2 217 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 CSH2P0DML3 217 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 LAMP2P13473 410 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 HMGA1P17096 107 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 PON1P27169 355 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 ANXA13P27216 316 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 ADORA2BP29275 332 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 ZNF165P49910 485 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 APBA1Q02410 837 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 GJB7Q6PEY0 223 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 TRIM65Q6PJ69 517 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 POTEHQ6S545 545 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 DHX40Q8IX18 779 aaKnown RBP20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 NPAS3Q8IXF0 933 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 LEMD2Q8NC56 503 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 SHKBP1Q8TBC3 707 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 MCRS1Q96EZ8 462 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 CYFIP2Q96F07 1278 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 KREMEN1Q96MU8 473 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 DNAI2Q9GZS0 605 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 UBE2TQ9NPD8 197 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 MAGED2Q9UNF1 606 aaPredicted RBP20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 PCDHB4Q9Y5E5 795 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 MYO16Q9Y6X6 1858 aa20.68■□□□□ 0.9
SEMA3B-206ENST00000439487 A0A1W2PRU2 124 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 AP1G2O75843 785 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 ZNF18P17022 549 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 CDK11BP21127 795 aaKnown RBP20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 ACO1P21399 889 aaKnown RBP20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 GABRR2P28476 465 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 GCNT1Q02742 428 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 TEAD2Q15562 447 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 PPP1R26Q5T8A7 1209 aaPredicted RBP20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 GAREM2Q75VX8 874 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 ST13P5Q8NFI4 369 aaPredicted RBP20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 KHSRPQ92945 711 aaKnown RBP eCLIP20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 SMARCD1Q96GM5 515 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 SPATA17Q96L03 361 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 C8orf48Q96LL4 319 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 KCNK16Q96T55 309 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 HNRNPABQ99729 332 aaKnown RBP20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 IL21Q9HBE4 155 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 EPS15L1Q9UBC2 864 aa20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 NUP210Q8TEM1 1887 aaPredicted RBP20.67■□□□□ 0.9
SEMA3B-206ENST00000439487 SMTNL1A8MU46 457 aa20.66■□□□□ 0.9
SEMA3B-206ENST00000439487 TNFRSF10AO00220 468 aa20.66■□□□□ 0.9
SEMA3B-206ENST00000439487 NOL4O94818 638 aa20.66■□□□□ 0.9
SEMA3B-206ENST00000439487 TMEM270Q6UE05 265 aa20.66■□□□□ 0.9
SEMA3B-206ENST00000439487 SMOQ99835 787 aa20.66■□□□□ 0.9
SEMA3B-206ENST00000439487 ATXN3LQ9H3M9 355 aa20.66■□□□□ 0.9
SEMA3B-206ENST00000439487 SIX2Q9NPC8 291 aa20.66■□□□□ 0.9
SEMA3B-206ENST00000439487 KRT82Q9NSB4 513 aa20.66■□□□□ 0.9
SEMA3B-206ENST00000439487 LIMA1Q9UHB6 759 aaKnown RBP20.66■□□□□ 0.9
SEMA3B-206ENST00000439487 TRIOO75962 3097 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 RNF225M0QZC1 329 aaPredicted RBP20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 BEST1O76090 585 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 MICAL2O94851 1124 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 ASGR2P07307 311 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 TPM2P07951 284 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 COPB1P53618 953 aaKnown RBP20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 KCNMA1Q12791 1236 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 IQCB1Q15051 598 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 ZMIZ2Q8NF64 920 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 ANKRD20A12PQ8NF67 263 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 APEX2Q9UBZ4 518 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 MUTYHQ9UIF7 546 aa20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 ZFP37Q9Y6Q3 630 aaPredicted RBP20.65■□□□□ 0.9
SEMA3B-206ENST00000439487 FGF19O95750 216 aa20.64■□□□□ 0.89
SEMA3B-206ENST00000439487 F11P03951 625 aa20.64■□□□□ 0.89
SEMA3B-206ENST00000439487 FAM200BP0CF97 657 aa20.64■□□□□ 0.89
SEMA3B-206ENST00000439487 ATP1A3P13637 1013 aa20.64■□□□□ 0.89
SEMA3B-206ENST00000439487 CD19P15391 556 aa20.64■□□□□ 0.89
SEMA3B-206ENST00000439487 MFAP3P55082 362 aa20.64■□□□□ 0.89
SEMA3B-206ENST00000439487 MAP3K7CLP57077 242 aa20.64■□□□□ 0.89
SEMA3B-206ENST00000439487 USP46P62068 366 aa20.64■□□□□ 0.89
SEMA3B-206ENST00000439487 CYP4F8P98187 520 aa20.64■□□□□ 0.89
SEMA3B-206ENST00000439487 ARHGAP44Q17R89 818 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms