RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 MAML1Q92585 1016 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 PAIP2Q9BPZ3 127 aaKnown RBP12.73□□□□□ -0.37
HDAC8-214ENST00000439122 ADPGKQ9BRR6 497 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 CALN1Q9BXU9 219 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 ASB7Q9H672 318 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 HAUS2Q9NVX0 235 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDAC8-214ENST00000439122 AGAP1Q9UPQ3 857 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 EFR3BQ9Y2G0 817 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 USP15Q9Y4E8 981 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-214ENST00000439122 ACTL7BQ9Y614 415 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 FAM47DPA6NHR8 397 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 NDC80O14777 642 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 ALOX15BO15296 676 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 SPAG7O75391 227 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 BANF1O75531 89 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 RASSF9O75901 435 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 KRT15P19012 456 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 GCAP28676 217 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 ATICP31939 592 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 LAMC2Q13753 1193 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 TMEM132DQ14C87 1099 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 FAM187BQ17R55 369 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 FAM133BQ5BKY9 247 aaKnown RBP12.73□□□□□ -0.37
HDAC8-214ENST00000439122 BBS12Q6ZW61 710 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 PCGF5Q86SE9 256 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 CXorf38Q8TB03 319 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 NLRP7Q8WX94 980 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 KLC4Q9NSK0 619 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 GGT7Q9UJ14 662 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 USP18Q9UMW8 372 aa12.73□□□□□ -0.37
HDAC8-214ENST00000439122 MAGEB2O15479 319 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 SUN1O94901 812 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 GPD2P43304 727 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 POU5F1BQ06416 359 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 NR1H3Q13133 447 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 MAP1SQ66K74 1059 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-214ENST00000439122 TRABD2AQ86V40 505 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 AFG1LQ8WV93 481 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 FAXDC2Q96IV6 333 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 MAGEB18Q96M61 343 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 ADAM33Q9BZ11 813 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 CYP3A43Q9HB55 503 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 ABCF3Q9NUQ8 709 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-214ENST00000439122 SBF1O95248 1867 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 OAS1P00973 400 aaKnown RBP12.72□□□□□ -0.37
HDAC8-214ENST00000439122 HMGCRP04035 888 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 RDXP35241 583 aaKnown RBP12.72□□□□□ -0.37
HDAC8-214ENST00000439122 MNAT1P51948 309 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 GSCP56915 257 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-214ENST00000439122 IL9RQ01113 521 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 GAD2Q05329 585 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 MTM1Q13496 603 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 ANKRD22Q5VYY1 191 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 SUGP1Q8IWZ8 645 aaKnown RBP12.72□□□□□ -0.37
HDAC8-214ENST00000439122 PPIL6Q8IXY8 311 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 FUKQ8N0W3 1084 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 FAM71DQ8N9W8 422 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 MCRS1Q96EZ8 462 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 FRMD8P1Q9BZ68 369 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-214ENST00000439122 KIF9Q9HAQ2 790 aa12.72□□□□□ -0.37
HDAC8-214ENST00000439122 TRUB2O95900 331 aaKnown RBP12.71□□□□□ -0.37
HDAC8-214ENST00000439122 VDRP11473 427 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 RPL22P35268 128 aaKnown RBP12.71□□□□□ -0.37
HDAC8-214ENST00000439122 GABRB2P47870 512 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 NDST1P52848 882 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 EIF3EP60228 445 aaKnown RBP12.71□□□□□ -0.37
HDAC8-214ENST00000439122 PKN2Q16513 984 aaKnown RBP12.71□□□□□ -0.37
HDAC8-214ENST00000439122 TAZQ16635 292 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 SH3PXD2AQ5TCZ1 1133 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 ICE2Q659A1 982 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 SMYD5Q6GMV2 418 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 TAPT1Q6NXT6 567 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 SPATA21Q7Z572 469 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 TDRPQ86YL5 185 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 CMASQ8NFW8 434 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-214ENST00000439122 PYROXD1Q8WU10 500 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 CPT1BQ92523 772 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 SGSM3Q96HU1 749 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 ACAP3Q96P50 834 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 MAK16Q9BXY0 300 aaKnown RBP12.71□□□□□ -0.37
HDAC8-214ENST00000439122 TRABDQ9H4I3 376 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 VRTNQ9H8Y1 702 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 ASNSD1Q9NWL6 643 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 DPP3Q9NY33 737 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 BARX2Q9UMQ3 279 aaPredicted RBP12.71□□□□□ -0.37
HDAC8-214ENST00000439122 SLC12A4Q9UP95 1085 aa12.71□□□□□ -0.37
HDAC8-214ENST00000439122 VGLL3A8MV65 326 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 MCF2LO15068 1137 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 GRAP2O75791 330 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 DNAJC8O75937 253 aaPredicted RBP12.71□□□□□ -0.38
HDAC8-214ENST00000439122 ARL4CP56559 192 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 RBP5P82980 135 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.38
HDAC8-214ENST00000439122 CDO1Q16878 200 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 CCDC142Q17RM4 750 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 FNBP1LQ5T0N5 605 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 CYB5D1Q6P9G0 228 aa12.71□□□□□ -0.38
HDAC8-214ENST00000439122 UNC45BQ8IWX7 931 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms