RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PADI4Q9UM07 663 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 PRKAB1Q9Y478 270 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 SPATA31A3Q5VYP0 1347 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 NLRP1Q9C000 1473 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 LTBP1Q14766 1721 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 ITPR3Q14573 2671 aa3.83□□□□□ -1.8
HMGB1P18-201ENST00000438801 CFAP54Q96N23 3096 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 ABCA12Q86UK0 2595 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 ZNF518AQ6AHZ1 1483 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 PROB1E7EW31 1015 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 POLRMTO00411 1230 aaKnown RBP3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 TRIAP1O43715 76 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 PCDHGA12O60330 932 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 RPLP2P05387 115 aaKnown RBP3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 NR2F6P10588 404 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 LPOP22079 712 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 NDUFV1P49821 464 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 CCT8P50990 548 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 KIF23Q02241 960 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 TFF2Q03403 129 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 SLC10A2Q12908 348 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 GRM1Q13255 1194 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 SLC15A2Q16348 729 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 CCDC93Q567U6 631 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 SUMO4Q6EEV6 95 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 BHLHA9Q7RTU4 235 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 NECAB2Q7Z6G3 386 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 DDX42Q86XP3 938 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 PDSS2Q86YH6 399 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 CAMKK1Q8N5S9 505 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 VGLL2Q8N8G2 317 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 KAT5Q92993 513 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 SCAMP4Q969E2 229 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 RFKQ969G6 155 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 COA7Q96BR5 231 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 VRK1Q99986 396 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 TPSD1Q9BZJ3 242 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 TMX1Q9H3N1 280 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 MAN1C1Q9NR34 630 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 PCDHGA9Q9Y5G4 932 aaKnown RBP3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 PCDHGA8Q9Y5G5 932 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 PCDHGA7Q9Y5G6 932 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 PCDHGA6Q9Y5G7 932 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 PCDHGA3Q9Y5H0 932 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 MYO18BQ8IUG5 2567 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 KAT6AQ92794 2004 aa3.82□□□□□ -1.8
HMGB1P18-201ENST00000438801 TOPAZ1Q8N9V7 1692 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 IQGAP2Q13576 1575 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 GPATCH8Q9UKJ3 1502 aaKnown RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 ZNF804BA4D1E1 1349 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 F2RL2O00254 374 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 XPOTO43592 962 aaKnown RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 MYBL2P10244 700 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 ZFXP17010 805 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 MALP21145 153 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 DRD4P21917 467 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 PSMC1P62191 440 aaKnown RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 KHDC1Q4VXA5 237 aaKnown RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 PLAC9Q5JTB6 97 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 ZNF782Q6ZMW2 699 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 Q7L0L9 218 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 TTC7BQ86TV6 843 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 ZNF366Q8N895 744 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 Q8N9P0 234 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 NSUN6Q8TEA1 469 aaKnown RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 FKBP10Q96AY3 582 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 TEKT5Q96M29 485 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 OSBPL9Q96SU4 736 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 C1QTNF1Q9BXJ1 281 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 AMBRA1Q9C0C7 1298 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 SMOC2Q9H3U7 446 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 BRD9Q9H8M2 597 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 SIDT1Q9NXL6 827 aaKnown RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 EHD3Q9NZN3 535 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 RGPD3A6NKT7 1758 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 RGPD4Q7Z3J3 1758 aa3.81□□□□□ -1.8
HMGB1P18-201ENST00000438801 MYOM2P54296 1465 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 LAMA3Q16787 3333 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 ZNF785A8K8V0 405 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 H0YGN5 161 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 HNRNPCP07910 306 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 GJB1P08034 283 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 GNAI3P08754 354 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 EBLN1P0CF75 366 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 ITGB8P26012 769 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 CYP2C19P33261 490 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 GNAI1P63096 354 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 SSBP2P81877 361 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 EIF2B5Q13144 721 aaKnown RBP3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 SNAPC2Q13487 334 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 TMEM119Q4V9L6 283 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 MTX3Q5HYI7 312 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 TAF2Q6P1X5 1199 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 SLC4A10Q6U841 1118 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 KRT28Q7Z3Y7 464 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 AFAP1Q8N556 730 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 C9orf106Q8NAJ2 232 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms