RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CPS1P31327 1500 aa4.16□□□□□ -1.74
HMGB3P12-201ENST00000438745 SETBP1Q9Y6X0 1596 aa4.15□□□□□ -1.74
HMGB3P12-201ENST00000438745 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 WIPF3A6NGB9 483 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 GCOM1H8Y6P7 765 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 M0QYG6 137 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 THP07101 528 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 RHOP08100 348 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 U2AF1L5P0DN76 240 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 PCSK6P29122 969 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 ARFIP2P53365 341 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 SOX8P57073 446 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 U2AF1Q01081 240 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 FOXF2Q12947 444 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 BMPR2Q13873 1038 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 LLGL1Q15334 1064 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 AMOTQ4VCS5 1084 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 KHDC1LQ5JSQ8 128 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZNF772Q68DY9 489 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 FAM46DQ8NEK8 389 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 TIFAQ96CG3 184 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 C8orf48Q96LL4 319 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 TAAR9Q96RI9 348 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 ACTRT3Q9BYD9 372 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 SARS2Q9NP81 518 aaKnown RBP4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 OBP2AQ9NY56 170 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 EHD3Q9NZN3 535 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 DKK3Q9UBP4 350 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 FRMD4BQ9Y2L6 1034 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 PLEKHM1Q9Y4G2 1056 aa4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 COL3A1P02461 1466 aaPredicted RBP4.15□□□□□ -1.75
HMGB3P12-201ENST00000438745 SRCAPQ6ZRS2 3230 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 DENND4BO75064 1496 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 NEO1Q92859 1461 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 CGB1A6NKQ9 187 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 JUPP14923 745 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 CHRM3P20309 590 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 CD6P30203 668 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 AGFG1P52594 562 aaKnown RBP4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZNF134P52741 427 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 PROK1P58294 105 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 FGL2Q14314 439 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 GRM3Q14832 879 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 LONRF3Q496Y0 759 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 ICE2Q659A1 982 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 PPP4R4Q6NUP7 873 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 TMEM108Q6UXF1 575 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZNF788Q6ZQV5 615 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 SRRM1Q8IYB3 904 aaKnown RBP4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 FKBP10Q96AY3 582 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 SLC46A1Q96NT5 459 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 ARMT1Q9H993 441 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 SSX2IPQ9Y2D8 614 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZFYVE16Q7Z3T8 1539 aa4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 FRMPD2Q68DX3 1309 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P12-201ENST00000438745 TRAPPC8Q9Y2L5 1435 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 EFCAB5A4FU69 1503 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 ARHGEF12Q9NZN5 1544 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 PPM1DO15297 605 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 PRC1O43663 620 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 URI1O94763 535 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 UBXN7O94888 489 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 ATXN1LP0C7T5 689 aaKnown RBP4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 NR2F6P10588 404 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 ZFXP17010 805 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 GPD1P21695 349 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 VIPR2P41587 438 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 RAB1AP62820 205 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 IQCB1Q15051 598 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 TBCCQ15814 346 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 PLAC9Q5JTB6 97 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 AKNAD1Q5T1N1 836 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 DENND1CQ8IV53 801 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 CCAR1Q8IX12 1150 aaKnown RBP4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 CELF5Q8N6W0 485 aaKnown RBP4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 RUNDC1Q96C34 613 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 HAPLN3Q96S86 360 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 PTDSS2Q9BVG9 487 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 DPH1Q9BZG8 443 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 CPNE5Q9HCH3 593 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 XPR1Q9UBH6 696 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 STAP2Q9UGK3 403 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 ST3GAL5Q9UNP4 418 aa4.13□□□□□ -1.75
HMGB3P12-201ENST00000438745 FRMPD1Q5SYB0 1578 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 A6NNZ2 444 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 INO80B-WBP1J3KQ70 363 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 KIF3BO15066 747 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 ERC2O15083 957 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 TUSC2O75896 110 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 UNC5CO95185 931 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 TTLL1O95922 423 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 HTR1BP28222 390 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 PPIFP30405 207 aaKnown RBP4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 TBX4P57082 545 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 LOXL3P58215 753 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 TFF2Q03403 129 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 TSTD2Q5T7W7 516 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 CCDC181Q5TID7 509 aa4.12□□□□□ -1.75
HMGB3P12-201ENST00000438745 KSR2Q6VAB6 950 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms