RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 DPYSL4O14531 572 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 F11P03951 625 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 NPR3P17342 541 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 AOC1P19801 751 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 BMP6P22004 513 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 PRKCQQ04759 706 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 GRM2Q14416 872 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 NELFBQ8WX92 580 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 IRF7Q92985 503 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 FAXDC2Q96IV6 333 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 C8orf48Q96LL4 319 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 BCO2Q9BYV7 579 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 DNAI2Q9GZS0 605 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 SDCBP2Q9H190 292 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 TBC1D17Q9HA65 648 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 OBP2AQ9NY56 170 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 KIAA1468Q9P260 1216 aa26.33■■□□□ 1.81
RAPGEF1-206ENST00000438647 PPP1R3GB7ZBB8 358 aa26.32■■□□□ 1.8
RAPGEF1-206ENST00000438647 MLF2Q15773 248 aaPredicted RBP26.32■■□□□ 1.8
RAPGEF1-206ENST00000438647 CAMK4Q16566 473 aa26.32■■□□□ 1.8
RAPGEF1-206ENST00000438647 SLC44A4Q53GD3 710 aa26.32■■□□□ 1.8
RAPGEF1-206ENST00000438647 CLEC17AQ6ZS10 378 aa26.32■■□□□ 1.8
RAPGEF1-206ENST00000438647 DENND5BQ6ZUT9 1274 aa26.32■■□□□ 1.8
RAPGEF1-206ENST00000438647 FILIP1Q7Z7B0 1213 aa26.32■■□□□ 1.8
RAPGEF1-206ENST00000438647 YAF2Q8IY57 180 aa26.32■■□□□ 1.8
RAPGEF1-206ENST00000438647 STKLD1Q8NE28 680 aa26.32■■□□□ 1.8
RAPGEF1-206ENST00000438647 RAB20Q9NX57 234 aa26.32■■□□□ 1.8
RAPGEF1-206ENST00000438647 AVPR1AP37288 418 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 NDST1P52848 882 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 STARD6P59095 220 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 PAK1Q13153 545 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 WDR44Q5JSH3 913 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 TTI2Q6NXR4 508 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 FRMD5Q7Z6J6 570 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 TMEM150AQ86TG1 271 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 TMEM105Q8N8V8 129 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 B3GNT5Q9BYG0 378 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 ZNF518BQ9C0D4 1074 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 APOBEC3GQ9HC16 384 aaKnown RBP26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.31■■□□□ 1.82e-6■■■■■ 115.8
RAPGEF1-206ENST00000438647 CTNND2Q9UQB3 1225 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 WDFY4Q6ZS81 3184 aa26.31■■□□□ 1.8
RAPGEF1-206ENST00000438647 KMT2EQ8IZD2 1858 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 PTPRDP23468 1912 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 F8VP50 259 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 ZNF263O14978 683 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 GDI1P31150 447 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 INCA1Q0VD86 236 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 CCDC40Q4G0X9 1142 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 IER5LQ5T953 404 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 ACOT1Q86TX2 421 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 CMTM8Q8IZV2 173 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 CRYBG2Q8N1P7 616 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 TTC39CQ8N584 583 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 MED10Q9BTT4 135 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 SLC46A2Q9BY10 475 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 TRPV5Q9NQA5 729 aa26.3■■□□□ 1.8
RAPGEF1-206ENST00000438647 FCHO2Q0JRZ9 810 aa26.29■■□□□ 1.8
RAPGEF1-206ENST00000438647 FAM35AQ86V20 835 aa26.29■■□□□ 1.8
RAPGEF1-206ENST00000438647 MON1AQ86VX9 555 aa26.29■■□□□ 1.8
RAPGEF1-206ENST00000438647 MAB21L3Q8N8X9 362 aa26.29■■□□□ 1.8
RAPGEF1-206ENST00000438647 SMARCD1Q96GM5 515 aa26.29■■□□□ 1.8
RAPGEF1-206ENST00000438647 DUSP9Q99956 384 aaKnown RBP26.29■■□□□ 1.8
RAPGEF1-206ENST00000438647 MUC6Q6W4X9 2439 aa26.29■■□□□ 1.8
RAPGEF1-206ENST00000438647 NUP210Q8TEM1 1887 aaPredicted RBP26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 CLDN5O00501 218 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 CHADO15335 359 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 GNA14O95837 355 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 CBWD6Q4V339 395 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 CBWD3Q5JTY5 395 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 CBWD5Q5RIA9 395 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 TXNDC8Q6A555 127 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 CELF5Q8N6W0 485 aaKnown RBP26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 SLC35C1Q96A29 364 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 GBP4Q96PP9 640 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 TTLL2Q9BWV7 592 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 NT5C1AQ9BXI3 368 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 FAM124BQ9H5Z6 455 aaPredicted RBP26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 KIF9Q9HAQ2 790 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 COQ4Q9Y3A0 265 aa26.28■■□□□ 1.8
RAPGEF1-206ENST00000438647 KANSL1LA0AUZ9 987 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 TADA3O75528 432 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 PRAMEF12O95522 483 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 FGFR1OPO95684 399 aaKnown RBP26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 PPP3CCP48454 512 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 PTPN5P54829 565 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 BPIFB1Q8TDL5 484 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 SEMA4DQ92854 862 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 RSPRY1Q96DX4 576 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 DDX23Q9BUQ8 820 aaKnown RBP26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 CLSTN2Q9H4D0 955 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 DMAP1Q9NPF5 467 aaPredicted RBP26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 HMGXB4Q9UGU5 601 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 SIT1Q9Y3P8 196 aa26.27■■□□□ 1.8
RAPGEF1-206ENST00000438647 NCANO14594 1321 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 CD58P19256 250 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 PDE6CP51160 858 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 PLCB2Q00722 1185 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 ARHGAP29Q52LW3 1261 aa26.26■■□□□ 1.79
RAPGEF1-206ENST00000438647 TPRG1Q6ZUI0 275 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms