RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 MIS12Q9H081 205 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 UBE2TQ9NPD8 197 aaPredicted RBP12.18□□□□□ -0.46
SNHG3-202ENST00000437681 OBP2AQ9NY56 170 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.18□□□□□ -0.46
SNHG3-202ENST00000437681 EPS15L1Q9UBC2 864 aa12.18□□□□□ -0.46
SNHG3-202ENST00000437681 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.18□□□□□ -0.46
SNHG3-202ENST00000437681 TIMM13Q9Y5L4 95 aaPredicted RBP12.18□□□□□ -0.46
SNHG3-202ENST00000437681 UCHL3P15374 230 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 LMO2P25791 158 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 BCAT1P54687 386 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 SPOPLQ6IQ16 392 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 TRIM72Q6ZMU5 477 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 BEND5Q7L4P6 421 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 FAM35AQ86V20 835 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 PCED1BQ96HM7 432 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 KREMEN1Q96MU8 473 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 CDK5RAP1Q96SZ6 601 aaKnown RBP12.17□□□□□ -0.46
SNHG3-202ENST00000437681 TRIM62Q9BVG3 475 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 ZNF518BQ9C0D4 1074 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 FBXO44Q9H4M3 255 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 MMRN2Q9H8L6 949 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 TRPV4Q9HBA0 871 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 CYP4F11Q9HBI6 524 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 GDE1Q9NZC3 331 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 DNAJC12Q9UKB3 198 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 NME7Q9Y5B8 376 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 OBSL1O75147 1896 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
SNHG3-202ENST00000437681 SEC24AO95486 1093 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 SLC9A1P19634 815 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 CA8P35219 290 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 ZNF268Q14587 947 aaPredicted RBP12.17□□□□□ -0.46
SNHG3-202ENST00000437681 PKDCCQ504Y2 493 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 ARHGEF19Q8IW93 802 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 ARHGAP18Q8N392 663 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 EEF2KMTQ96G04 330 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 HSFY1Q96LI6 401 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 LSM14BQ9BX40 385 aaKnown RBP12.17□□□□□ -0.46
SNHG3-202ENST00000437681 VPS16Q9H269 839 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 PCDHB4Q9Y5E5 795 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 C2orf16Q68DN1 1984 aa12.17□□□□□ -0.46
SNHG3-202ENST00000437681 MYBPHLA2RUH7 354 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 C19orf67A6NJJ6 358 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 XPO1O14980 1071 aaKnown RBP12.16□□□□□ -0.46
SNHG3-202ENST00000437681 GFPT2O94808 682 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 LSM8O95777 96 aaKnown RBP12.16□□□□□ -0.46
SNHG3-202ENST00000437681 SERPINC1P01008 464 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 FAM200BP0CF97 657 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 CDH5P33151 784 aaPredicted RBP12.16□□□□□ -0.46
SNHG3-202ENST00000437681 SCNN1AP37088 669 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 ACADSBP45954 432 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 PLA2G4AP47712 749 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 PTK2Q05397 1052 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 MDH1BQ5I0G3 518 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 TAF3Q5VWG9 929 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 OTOP3Q7RTS5 596 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 PALB2Q86YC2 1186 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 RBBP8NLQ8NC74 664 aaPredicted RBP12.16□□□□□ -0.46
SNHG3-202ENST00000437681 SLC7A14Q8TBB6 771 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 IRGQQ8WZA9 623 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 ZBTB9Q96C00 473 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 PHF7Q9BWX1 381 aaPredicted RBP12.16□□□□□ -0.46
SNHG3-202ENST00000437681 LRRC3Q9BY71 257 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 PCDHGC5Q9Y5F6 944 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 CCDC195A0A1B0GUA6 201 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 PER2O15055 1255 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 WEE2P0C1S8 567 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 RPL17P18621 184 aaKnown RBP12.16□□□□□ -0.46
SNHG3-202ENST00000437681 STAT1P42224 750 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 UBASH3AP57075 661 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 BST2Q10589 180 aaKnown RBP12.16□□□□□ -0.46
SNHG3-202ENST00000437681 RAB41Q5JT25 222 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 PRSS36Q5K4E3 855 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 SCARA3Q6AZY7 606 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 LUZP1Q86V48 1076 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 FUKQ8N0W3 1084 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 CYFIP2Q96F07 1278 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 ASB2Q96Q27 587 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 IGFLR1Q9H665 355 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 HESX1Q9UBX0 185 aa12.16□□□□□ -0.46
SNHG3-202ENST00000437681 BZW2Q9Y6E2 419 aaKnown RBP12.16□□□□□ -0.46
SNHG3-202ENST00000437681 LINC01565O15544 149 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 FBXO21O94952 628 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 FERP16591 822 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 NPR3P17342 541 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 CDH8P55286 799 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 RBM23Q86U06 439 aaKnown RBP12.15□□□□□ -0.46
SNHG3-202ENST00000437681 SMG7Q92540 1137 aaKnown RBP12.15□□□□□ -0.46
SNHG3-202ENST00000437681 ASAH2Q9NR71 780 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 TMLHEQ9NVH6 421 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 ASNSD1Q9NWL6 643 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNHG3-202ENST00000437681 F8VZ95 297 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 O00370 1275 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 SART1O43290 800 aaKnown RBP12.15□□□□□ -0.46
SNHG3-202ENST00000437681 SOX5P35711 763 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 RAP1GAPP47736 663 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 TWF1Q12792 350 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 DUSP4Q13115 394 aa12.15□□□□□ -0.46
SNHG3-202ENST00000437681 SYCP1Q15431 976 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms