RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 SMARCD1Q96GM5 515 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 PGLYRP2Q96PD5 576 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 TGS1Q96RS0 853 aaKnown RBP22.58■■□□□ 1.21
YBX1-203ENST00000436427 DUSP16Q9BY84 665 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 PBX4Q9BYU1 374 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 LACRTQ9GZZ8 138 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 THAP2Q9H0W7 228 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 SYNCQ9H7C4 482 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 KCND1Q9NSA2 647 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 ADAM22Q9P0K1 906 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 INTUQ9ULD6 942 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 BACE2Q9Y5Z0 518 aa22.58■■□□□ 1.21
YBX1-203ENST00000436427 TULP2O00295 520 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 SETSIPP0DME0 302 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 NPR3P17342 541 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 BDNFP23560 247 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 PDCLQ13371 301 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 MON1BQ7L1V2 547 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 PHF13Q86YI8 300 aaPredicted RBP22.57■■□□□ 1.2
YBX1-203ENST00000436427 MCOLN2Q8IZK6 566 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 MSANTD4Q8NCY6 345 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 ZNF653Q96CK0 615 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 TSGA10Q9BZW7 698 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 ZBP1Q9H171 429 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 ABI2Q9NYB9 513 aaPredicted RBP22.57■■□□□ 1.2
YBX1-203ENST00000436427 TRIM10Q9UDY6 481 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 MSRAQ9UJ68 235 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 PLXNA4Q9HCM2 1894 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 CSPG5O95196 566 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 TMEM253P0C7T8 217 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 MMP8P22894 467 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 RGS7P49802 495 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 MAP3K7CLP57077 242 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 RAB30Q15771 203 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 SLC8B1Q6J4K2 584 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 CLEC20AQ6ZU45 233 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 SLC35F5Q8WV83 523 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 TRIM11Q96F44 468 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 CPXM1Q96SM3 734 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 C11orf84Q9BUA3 381 aaPredicted RBP22.57■■□□□ 1.2
YBX1-203ENST00000436427 PCDHB5Q9Y5E4 795 aa22.57■■□□□ 1.2
YBX1-203ENST00000436427 RANBP2P49792 3224 aaKnown RBP22.56■■□□□ 1.2
YBX1-203ENST00000436427 GOLGA6L9A6NEM1 432 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 C5orf67F2Z3F1 127 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 PJA2O43164 708 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 ADAM12O43184 909 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 ATMINO43313 823 aaPredicted RBP22.56■■□□□ 1.2
YBX1-203ENST00000436427 KRT86O43790 486 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 BEST1O76090 585 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 CTSAP10619 480 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 OR1D2P34982 312 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 TERF1P54274 439 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 GPC5P78333 572 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 TAP1Q03518 808 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 C1QBPQ07021 282 aaKnown RBP22.56■■□□□ 1.2
YBX1-203ENST00000436427 GPR17Q13304 367 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 PTPN20Q4JDL3 420 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 PMF1Q6P1K2 205 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 TMC7Q7Z402 723 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 PHLDB2Q86SQ0 1253 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 IPO4Q8TEX9 1081 aaKnown RBP22.56■■□□□ 1.2
YBX1-203ENST00000436427 SAMD11Q96NU1 681 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 CLSTN3Q9BQT9 956 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 NKX2-4Q9H2Z4 354 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 MYO1AQ9UBC5 1043 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 GUCA1BQ9UMX6 200 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 LZTS1Q9Y250 596 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 SSX2IPQ9Y2D8 614 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 DUSP10Q9Y6W6 482 aa22.56■■□□□ 1.2
YBX1-203ENST00000436427 PIK3R2O00459 728 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 XPO1O14980 1071 aaKnown RBP22.55■■□□□ 1.2
YBX1-203ENST00000436427 ABL1P00519 1130 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 CALB1P05937 261 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 RB1P06400 928 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 ARHGAP25P42331 645 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 CACNA2D1P54289 1103 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 ROR1Q01973 937 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 PTPN14Q15678 1187 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 CYP4A22Q5TCH4 519 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 LIN9Q5TKA1 542 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 RNF19BQ6ZMZ0 732 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 POF1BQ8WVV4 589 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 ARHGEF26Q96DR7 871 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 VCPIP1Q96JH7 1222 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 SMOQ99835 787 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 ENTPD7Q9NQZ7 604 aa22.55■■□□□ 1.2
YBX1-203ENST00000436427 MYBL1P10243 752 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 CYP2F1P24903 491 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 PLA2G4AP47712 749 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 CREMQ03060 361 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 CFAP221Q4G0U5 840 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 PPP2R2DQ66LE6 453 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 CHRDL2Q6WN34 429 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 ATAD1Q8NBU5 361 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 SPPL3Q8TCT6 385 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 FUBP3Q96I24 572 aaKnown RBP eCLIP22.54■■□□□ 1.2
YBX1-203ENST00000436427 KCNK16Q96T55 309 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 TCF25Q9BQ70 676 aa22.54■■□□□ 1.2
YBX1-203ENST00000436427 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.54■■□□□ 1.21e-26■■□□□ 11.5
YBX1-203ENST00000436427 TJP2Q9UDY2 1190 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms