RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MON1AQ86VX9 555 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 GPD1LQ8N335 351 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 PDILTQ8N807 584 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 C1orf127Q8N9H9 656 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 C12orf50Q8NA57 414 aaPredicted RBP8.32□□□□□ -1.08
VPS50-203ENST00000436177 CCDC26Q8TAB7 109 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 SPATA18Q8TC71 538 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 LEO1Q8WVC0 666 aaPredicted RBP8.32□□□□□ -1.08
VPS50-203ENST00000436177 ATP2A3Q93084 1043 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 ACBD6Q9BR61 282 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 MKNK1Q9BUB5 465 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 SLC46A2Q9BY10 475 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 MTMR12Q9C0I1 747 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 EBF3Q9H4W6 596 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 PDE11AQ9HCR9 933 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 EHD2Q9NZN4 543 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 L1RE1Q9UN81 338 aa8.32□□□□□ -1.08
VPS50-203ENST00000436177 CNOT1A5YKK6 2376 aaKnown RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 DCDC2BA2VCK2 349 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 ZNF233A6NK53 670 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 SOBPA7XYQ1 873 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 RPP40O75818 363 aaKnown RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 HSP90AA1P07900 732 aaKnown RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 USP17L7P0C7H9 530 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 SYT1P21579 422 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 ACAT1P24752 427 aaKnown RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 HOXA6P31267 233 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 GPR15P49685 360 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 ATXN1P54253 815 aaKnown RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 ASIC1P78348 528 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 KCNA1Q09470 495 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 RESTQ13127 1097 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 SRSF5Q13243 272 aaKnown RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 CUL4AQ13619 759 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 CCINQ13939 588 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 ZNF268Q14587 947 aaPredicted RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 MTF1Q14872 753 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 ELF2Q15723 593 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 CSRP2Q16527 193 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 DDR2Q16832 855 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 DUOXA2Q1HG44 320 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 FBXO43Q4G163 708 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 AASDHQ4L235 1098 aaPredicted RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 SDHAF4Q5VUM1 108 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 TXNDC8Q6A555 127 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 CRELD2Q6UXH1 353 aaPredicted RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 HS2ST1Q7LGA3 356 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 LRRTM3Q86VH5 581 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 WDR5BQ86VZ2 330 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 TOP6BLQ8N6T0 577 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 DDX1Q92499 740 aaKnown RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 USP13Q92995 863 aaPredicted RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 ACDQ96AP0 544 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 FUBP3Q96I24 572 aaKnown RBP eCLIP8.31□□□□□ -1.08
VPS50-203ENST00000436177 HPDLQ96IR7 371 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 ZNF396Q96N95 335 aaPredicted RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 CLIC6Q96NY7 704 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 LRRC3BQ96PB8 259 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 FNBP1Q96RU3 617 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 MMS19Q96T76 1030 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 P2RY13Q9BPV8 354 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 CBWD1Q9BRT8 395 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 PANK2Q9BZ23 570 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 IKZF4Q9H2S9 585 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 ZSCAN16Q9H4T2 348 aaPredicted RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 PCIF1Q9H4Z3 704 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 KIAA1586Q9HCI6 787 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 PARD6AQ9NPB6 346 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 SEMA4GQ9NTN9 838 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 DUS2Q9NX74 493 aaKnown RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 CCL26Q9Y258 94 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.31□□□□□ -1.08
VPS50-203ENST00000436177 MYH11P35749 1972 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 DCHS1Q96JQ0 3298 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 PATJQ8NI35 1801 aa8.31□□□□□ -1.08
VPS50-203ENST00000436177 K7ESF4 209 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 ST8SIA5O15466 376 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 GDF9O60383 454 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 PRPF6O94906 941 aaKnown RBP8.3□□□□□ -1.08
VPS50-203ENST00000436177 F11P03951 625 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 DLATP10515 647 aaKnown RBP8.3□□□□□ -1.08
VPS50-203ENST00000436177 ARSAP15289 507 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 HMGA1P17096 107 aaKnown RBP8.3□□□□□ -1.08
VPS50-203ENST00000436177 DRD1P21728 446 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 CYP2F1P24903 491 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 MAGEA11P43364 429 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 CASP5P51878 434 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 TNNC1P63316 161 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 PRR20EP86478 221 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 PRR20CP86479 221 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 PRR20DP86480 221 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 PRR20BP86481 221 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 PRR20AP86496 221 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 FAM160A1Q05DH4 1040 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 DMWDQ09019 674 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 FOXC1Q12948 553 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 PSMD2Q13200 908 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 GAS6Q14393 721 aa8.3□□□□□ -1.08
VPS50-203ENST00000436177 SLC39A14Q15043 492 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms