RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 SNCAIPQ9Y6H5 919 aa10.94□□□□□ -0.66
CLSTN1-203ENST00000435891 IGF2BP3O00425 579 aaKnown RBP eCLIP10.93□□□□□ -0.664e-7■□□□□ 10.3
CLSTN1-203ENST00000435891 CST8O60676 142 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 USP2O75604 605 aaPredicted RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 LSM8O95777 96 aaKnown RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 KRT19P08727 400 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 CETN2P41208 172 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 SLC1A5Q15758 541 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 MAPK6Q16659 721 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 SYCP2LQ5T4T6 812 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 CDCA2Q69YH5 1023 aaPredicted RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 NKD2Q969F2 451 aaPredicted RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 PPP1R16BQ96T49 567 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 TRABDQ9H4I3 376 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 TMEM165Q9HC07 324 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 SIX4Q9UIU6 781 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 KRT15P19012 456 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 EIF4BP23588 611 aaKnown RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 CDH5P33151 784 aaPredicted RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 PCK1P35558 622 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 LMNB2Q03252 620 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 PIGHQ14442 188 aaPredicted RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 MTFR1Q15390 333 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 METTL7BQ6UX53 244 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 MAK16Q9BXY0 300 aaKnown RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 PITPNM3Q9BZ71 974 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 PAPOLBQ9NRJ5 636 aaKnown RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 DRG1Q9Y295 367 aaKnown RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 INO80B-WBP1J3KQ70 363 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 PIK3R2O00459 728 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 ALOX15BO15296 676 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 ITGAVP06756 1048 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 KRT16P08779 473 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 KRT3P12035 628 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 CLCN3P51790 818 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 LACTBP83111 547 aaPredicted RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 MORF4L2Q15014 288 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 SH3PXD2AQ5TCZ1 1133 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 APOBEC3FQ8IUX4 373 aaKnown RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 CPT1BQ92523 772 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 INO80BQ9C086 356 aaPredicted RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 PTPRHQ9HD43 1115 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 PCDHGC3Q9UN70 934 aa10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 FARP1Q9Y4F1 1045 aaPredicted RBP10.93□□□□□ -0.66
CLSTN1-203ENST00000435891 SOCS7O14512 581 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 ERBB2P04626 1255 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 NFICP08651 508 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 CTCFP49711 727 aaPredicted RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 PAPOLAP51003 745 aaKnown RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 EFNA5P52803 228 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 TFDP1Q14186 410 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 LRRC23Q53EV4 343 aaPredicted RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 FAM160B1Q5W0V3 765 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 UNC45BQ8IWX7 931 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 FGD4Q96M96 766 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 GPR20Q99678 358 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 SPATC1LQ9H0A9 340 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 SMYD3Q9H7B4 428 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 METTL5Q9NRN9 209 aaKnown RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 NOP53Q9NZM5 478 aaKnown RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 ACTL7BQ9Y614 415 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 LOC285556D6RIA3 1793 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 TMEM63AO94886 807 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 NQO1P15559 274 aaKnown RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 RAD23BP54727 409 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 COPS2P61201 443 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 PSMC1P62191 440 aaKnown RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 SH3D19Q5HYK7 790 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 IER5Q5VY09 327 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 RIOX2Q8IUF8 465 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 NIPA2Q8N8Q9 360 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 KLHL23Q8NBE8 558 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 SLC16A10Q8TF71 515 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 TRIM4Q9C037 500 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 SUDS3Q9H7L9 328 aaPredicted RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 PCDH9Q9HC56 1237 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 CHCHD3Q9NX63 227 aaKnown RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 DNAH12Q6ZR08 3092 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 BRCA1P38398 1863 aaKnown RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 WDR90Q96KV7 1748 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 PDHA1P08559 390 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 PROZP22891 400 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 RAB27AP51159 221 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 ATF7IP2Q5U623 682 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 HHATQ5VTY9 493 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 PPP1R21Q6ZMI0 780 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 C1orf127Q8N9H9 656 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 PIWIL1Q96J94 861 aaKnown RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 KLF6Q99612 283 aaPredicted RBP10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 RXFP1Q9HBX9 757 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 EVPLQ92817 2033 aa10.92□□□□□ -0.66
CLSTN1-203ENST00000435891 MCM3APO60318 1980 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 IGKV6-21A0A0C4DH24 114 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 SIGLEC16A6NMB1 481 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 GPR25O00155 361 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 SETSIPP0DME0 302 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 PTPN7P35236 360 aa10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 RPL22P35268 128 aaKnown RBP10.91□□□□□ -0.66
CLSTN1-203ENST00000435891 AP3M2P53677 418 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms