RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ATXN1LP0C7T5 689 aaKnown RBP11.27□□□□□ -0.61
CPNE1-214ENST00000435747 PEX3P56589 373 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 GRIN1Q05586 938 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 ZNF33AQ06730 810 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 DCAF4L1Q3SXM0 396 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 ARSHQ5FYA8 562 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 COLEC12Q5KU26 742 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 ATF7IP2Q5U623 682 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 SLC36A4Q6YBV0 504 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 CMTM8Q8IZV2 173 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 PGBD3Q8N328 593 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 CEP120Q8N960 986 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 BAP1Q92560 729 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 DDX12PQ92771 950 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 NXPE2Q96DL1 559 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 IFT74Q96LB3 600 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 ACO2Q99798 780 aaKnown RBP11.27□□□□□ -0.61
CPNE1-214ENST00000435747 SLC46A2Q9BY10 475 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 CRISPLD1Q9H336 500 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 KIF9Q9HAQ2 790 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 C17orf75Q9HAS0 396 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 UPF2Q9HAU5 1272 aaKnown RBP11.27□□□□□ -0.61
CPNE1-214ENST00000435747 PRDM16Q9HAZ2 1276 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 TOR4AQ9NXH8 423 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 ZMYM5Q9UJ78 669 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 SMC3Q9UQE7 1217 aa11.27□□□□□ -0.61
CPNE1-214ENST00000435747 A0A1W2PQD8 194 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 VWA3AA6NCI4 1184 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 PLK4O00444 970 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 DKK1O94907 266 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 VNN2O95498 520 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 HNRNPLP14866 589 aaKnown RBP eCLIP11.26□□□□□ -0.61
CPNE1-214ENST00000435747 MARCKSP29966 332 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-214ENST00000435747 MCM4P33991 863 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 IL12RB1P42701 662 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 CXADRP78310 365 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 SEMG2Q02383 582 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 SOX4Q06945 474 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-214ENST00000435747 TMEM161BQ8NDZ6 487 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 HMGB4Q8WW32 186 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 SPIRE2Q8WWL2 714 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 USP13Q92995 863 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-214ENST00000435747 WBP1Q96G27 269 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 SUSD3Q96L08 255 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 AK8Q96MA6 479 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 DRC1Q96MC2 740 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 CDC6Q99741 560 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 TIPINQ9BVW5 301 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 BACH2Q9BYV9 841 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 SEMA4CQ9C0C4 833 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 CDT1Q9H211 546 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 BLOC1S4Q9NUP1 217 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 TDP1Q9NUW8 608 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 SLC38A7Q9NVC3 462 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 SLC27A5Q9Y2P5 690 aa11.26□□□□□ -0.61
CPNE1-214ENST00000435747 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-214ENST00000435747 C2CD3Q4AC94 2353 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 SMIM28A0A1B0GU29 152 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 SFI1A8K8P3 1242 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 H3BQV1 296 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 K7EQS6 105 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 K7ERI5 159 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 SLC26A4O43511 780 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 OR4Q2P0C623 313 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 C6P13671 934 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 GRM5P41594 1212 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 ZNF131P52739 623 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 MRPS21P82921 87 aaKnown RBP11.25□□□□□ -0.61
CPNE1-214ENST00000435747 RHDQ02161 417 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 GRIK2Q13002 908 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 DMP1Q13316 513 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-214ENST00000435747 VEPH1Q14D04 833 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 BRAPQ7Z569 592 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 FMNL3Q8IVF7 1028 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 RGL4Q8IZJ4 473 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 ATP2A3Q93084 1043 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 ZMAT2Q96NC0 199 aaKnown RBP11.25□□□□□ -0.61
CPNE1-214ENST00000435747 FIZ1Q96SL8 496 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 TARS2Q9BW92 718 aaKnown RBP11.25□□□□□ -0.61
CPNE1-214ENST00000435747 ZDHHC5Q9C0B5 715 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 HAPLN2Q9GZV7 340 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 FAM124BQ9H5Z6 455 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-214ENST00000435747 DUS2Q9NX74 493 aaKnown RBP11.25□□□□□ -0.61
CPNE1-214ENST00000435747 KCND2Q9NZV8 630 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 NXF1Q9UBU9 619 aaKnown RBP11.25□□□□□ -0.61
CPNE1-214ENST00000435747 SUSD2Q9UGT4 822 aa11.25□□□□□ -0.61
CPNE1-214ENST00000435747 RBM19Q9Y4C8 960 aaKnown RBP11.25□□□□□ -0.61
CPNE1-214ENST00000435747 SPTBN1Q01082 2364 aaKnown RBP11.24□□□□□ -0.61
CPNE1-214ENST00000435747 OBSL1O75147 1896 aa11.24□□□□□ -0.61
CPNE1-214ENST00000435747 SLC16A4O15374 487 aa11.24□□□□□ -0.61
CPNE1-214ENST00000435747 SOAT2O75908 522 aa11.24□□□□□ -0.61
CPNE1-214ENST00000435747 KLF8O95600 359 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-214ENST00000435747 PLA2G4BP0C869 781 aa11.24□□□□□ -0.61
CPNE1-214ENST00000435747 MAPTP10636 758 aaKnown RBP11.24□□□□□ -0.61
CPNE1-214ENST00000435747 PLS3P13797 630 aa11.24□□□□□ -0.61
CPNE1-214ENST00000435747 GNSP15586 552 aa11.24□□□□□ -0.61
CPNE1-214ENST00000435747 LIG1P18858 919 aa11.24□□□□□ -0.61
CPNE1-214ENST00000435747 IFNAR2P48551 515 aa11.24□□□□□ -0.61
CPNE1-214ENST00000435747 NCKAP1LP55160 1127 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms