RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 IFT22Q9H7X7 185 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 TMEM206Q9H813 350 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 WDR6Q9NNW5 1121 aaKnown RBP7.65□□□□□ -1.18
GARNL3-205ENST00000435213 WASH6PQ9NQA3 447 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 BLOC1S4Q9NUP1 217 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 PCP4L1A6NKN8 68 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 C19orf81C9J6K1 198 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 RGS13O14921 159 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 SIN3BO75182 1162 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 ALX3O95076 343 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 PSMG1O95456 288 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 FUCA1P04066 466 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 NUDT17P0C025 328 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 EEF2P13639 858 aaKnown RBP7.65□□□□□ -1.18
GARNL3-205ENST00000435213 ZNF135P52742 658 aaPredicted RBP7.65□□□□□ -1.18
GARNL3-205ENST00000435213 RPL26P61254 145 aaKnown RBP7.65□□□□□ -1.18
GARNL3-205ENST00000435213 GRB10Q13322 594 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 PPP2R5EQ16537 467 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 KHDC1Q4VXA5 237 aaKnown RBP7.65□□□□□ -1.18
GARNL3-205ENST00000435213 FAM47AQ5JRC9 791 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 IDO2Q6ZQW0 420 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 NEK8Q86SG6 692 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 CPSF7Q8N684 471 aaKnown RBP7.65□□□□□ -1.18
GARNL3-205ENST00000435213 CHPT1Q8WUD6 406 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 NRG4Q8WWG1 115 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 PGM2Q96G03 612 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.65□□□□□ -1.18
GARNL3-205ENST00000435213 ZMYND12Q9H0C1 365 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 KLHL25Q9H0H3 589 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 SMARCAD1Q9H4L7 1026 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 PLK2Q9NYY3 685 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 TBC1D14Q9P2M4 693 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 ATP6V1HQ9UI12 483 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 SLC8A2Q9UPR5 921 aa7.65□□□□□ -1.18
GARNL3-205ENST00000435213 A0A0A6YYK5 440 aaPredicted RBP7.65□□□□□ -1.19
GARNL3-205ENST00000435213 GTPBP10A4D1E9 387 aaKnown RBP7.65□□□□□ -1.19
GARNL3-205ENST00000435213 KRIT1O00522 736 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 TOMM70O94826 608 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 TRIM23P36406 574 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 MMP13P45452 471 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 FXR2P51116 673 aaKnown RBP eCLIP7.65□□□□□ -1.19
GARNL3-205ENST00000435213 SNX16P57768 344 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 RNASE9P60153 205 aaKnown RBP7.65□□□□□ -1.19
GARNL3-205ENST00000435213 PTK2Q05397 1052 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 RNASELQ05823 741 aaKnown RBP7.65□□□□□ -1.19
GARNL3-205ENST00000435213 FCHO2Q0JRZ9 810 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 SQLEQ14534 574 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 HEATR3Q7Z4Q2 680 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 CCDC28AQ8IWP9 274 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 KIAA2013Q8IYS2 634 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 SYCE1Q8N0S2 351 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 PCYOX1LQ8NBM8 494 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 PNMA1Q8ND90 353 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 PACSIN1Q9BY11 444 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 GANQ9H2C0 597 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 ARMC7Q9H6L4 198 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 MAD2L2Q9UI95 211 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 SOX13Q9UN79 622 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 STXBP5LQ9Y2K9 1186 aa7.65□□□□□ -1.19
GARNL3-205ENST00000435213 TNRC6CQ9HCJ0 1690 aaKnown RBP7.64□□□□□ -1.19
GARNL3-205ENST00000435213 DAPK3O43293 454 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 HAUS5O94927 633 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 ALOX5P09917 674 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 PSMA3P25788 255 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 PRKAR1BP31321 381 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 HNF1BP35680 557 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 C21orf59P57076 290 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 CHRNDQ07001 517 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 EDRF1Q3B7T1 1238 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 ZNF829Q3KNS6 432 aaPredicted RBP7.64□□□□□ -1.19
GARNL3-205ENST00000435213 TRAPPC3LQ5T215 181 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 METTL11BQ5VVY1 283 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 SLFN11Q7Z7L1 901 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 TICAM1Q8IUC6 712 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 RAD54LQ92698 747 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 PRMT1Q99873 361 aaKnown RBP7.64□□□□□ -1.19
GARNL3-205ENST00000435213 SIAEQ9HAT2 523 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 MRPL39Q9NYK5 338 aaKnown RBP7.64□□□□□ -1.19
GARNL3-205ENST00000435213 HDAC9Q9UKV0 1011 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 CLEC11AQ9Y240 323 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 TMEM5Q9Y2B1 443 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 SNPHO15079 494 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 DNAJC6O75061 913 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 CYP19A1P11511 503 aaPredicted RBP7.64□□□□□ -1.19
GARNL3-205ENST00000435213 GFAPP14136 432 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 HOXC13P31276 330 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 TECP42680 631 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 CHN2P52757 468 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 PLTPP55058 493 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 NPEPPSP55786 919 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 NFIAQ12857 509 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 LETM2Q2VYF4 491 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 TMC5Q6UXY8 1006 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 FRA10AC1Q70Z53 315 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 GPIHBP1Q8IV16 184 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 TRIM59Q8IWR1 403 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 METTL13Q8N6R0 699 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 RIN3Q8TB24 985 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 CFAP57Q96MR6 1250 aa7.64□□□□□ -1.19
GARNL3-205ENST00000435213 PNMA5Q96PV4 448 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms