RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SLC10A6Q3KNW5 377 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 ZNF618Q5T7W0 954 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 VTI1AQ96AJ9 217 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 FAM167AQ96KS9 214 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.35■□□□□ 0.21
SCARF1-203ENST00000434376 TUBGCP4Q9UGJ1 667 aa16.35■□□□□ 0.21
SCARF1-203ENST00000434376 PIN4Q9Y237 131 aaKnown RBP16.35■□□□□ 0.21
SCARF1-203ENST00000434376 BTBD19C9JJ37 291 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 RARGP13631 454 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 PTPN11Q06124 597 aaPredicted RBP16.34■□□□□ 0.21
SCARF1-203ENST00000434376 KRT81Q14533 505 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 AGBL2Q5U5Z8 902 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 DARS2Q6PI48 645 aaKnown RBP16.34■□□□□ 0.21
SCARF1-203ENST00000434376 TRPM8Q7Z2W7 1104 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 AGAP11Q8TF27 550 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 DNAJB3Q8WWF6 145 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 FAM129AQ9BZQ8 928 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 YIPF3Q9GZM5 350 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 NXF3Q9H4D5 531 aaKnown RBP16.34■□□□□ 0.21
SCARF1-203ENST00000434376 TSPAN16Q9UKR8 245 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 TCRBV7S3A2A0A539 114 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 TMEM191CA6NGB0 347 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 ATP2A1O14983 1001 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 TFE3P19532 575 aaPredicted RBP16.34■□□□□ 0.21
SCARF1-203ENST00000434376 MIPP30301 263 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 ICAM3P32942 547 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 MBTD1Q05BQ5 628 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 SLMAPQ14BN4 828 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 PPP2R5EQ16537 467 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 PPP1R21Q6ZMI0 780 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 ART4Q93070 314 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 SLITRK1Q96PX8 696 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 ECT2Q9H8V3 914 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 IFT122Q9HBG6 1241 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 SEPT10Q9P0V9 454 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 NAALADL1Q9UQQ1 740 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 SPDYE5A6NIY4 337 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 IGF2BP3O00425 579 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCARF1-203ENST00000434376 TJP3O95049 919 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 CCDC130P13994 396 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 MPP2Q14168 576 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 SEPT7Q16181 437 aaKnown RBP16.34■□□□□ 0.21
SCARF1-203ENST00000434376 UNC45BQ8IWX7 931 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 ADAM32Q8TC27 787 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 SPATA18Q8TC71 538 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 CFAP36Q96G28 342 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 ACAP3Q96P50 834 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 PGLYRP2Q96PD5 576 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 TMPRSS4Q9NRS4 437 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 ADGRA2Q96PE1 1338 aa16.34■□□□□ 0.21
SCARF1-203ENST00000434376 LRCH4O75427 683 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 TGFB3P10600 412 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 RBP3P10745 1247 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 YWHAGP61981 247 aaKnown RBP eCLIP16.33■□□□□ 0.2
SCARF1-203ENST00000434376 SNAPC2Q13487 334 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 C6orf118Q5T5N4 469 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 TRIM11Q96F44 468 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 XYLT2Q9H1B5 865 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 LRRC19Q9H756 370 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 DPP3Q9NY33 737 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.33■□□□□ 0.2
SCARF1-203ENST00000434376 CALB1P05937 261 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 MYL3P08590 195 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 RAD23BP54727 409 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 RTP1P59025 263 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 DNAJC3Q13217 504 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 PLEKHA7Q6IQ23 1121 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 ZPBP2Q6X784 338 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 HASPINQ8TF76 798 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 RXFP2Q8WXD0 754 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 SGIP1Q9BQI5 828 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 MRPL45Q9BRJ2 306 aaKnown RBP16.33■□□□□ 0.2
SCARF1-203ENST00000434376 TTLL3Q9Y4R7 772 aa16.33■□□□□ 0.2
SCARF1-203ENST00000434376 ZNFX1Q9P2E3 1918 aaKnown RBP16.33■□□□□ 0.2
SCARF1-203ENST00000434376 A8MXQ7 604 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 TTC4O95801 387 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 GOLGA7BQ2TAP0 167 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 SH3D19Q5HYK7 790 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 ERMARDQ5T6L9 678 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 WLSQ5T9L3 541 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 TRAIPQ9BWF2 469 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 NSRP1Q9H0G5 558 aaKnown RBP16.32■□□□□ 0.2
SCARF1-203ENST00000434376 CNOT10Q9H9A5 744 aaKnown RBP16.32■□□□□ 0.2
SCARF1-203ENST00000434376 MAD1L1Q9Y6D9 718 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 ZC3H11AO75152 810 aaKnown RBP eCLIP16.32■□□□□ 0.2
SCARF1-203ENST00000434376 CELF2O95319 508 aaKnown RBP16.32■□□□□ 0.2
SCARF1-203ENST00000434376 CA4P22748 312 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 CTCFP49711 727 aaPredicted RBP16.32■□□□□ 0.2
SCARF1-203ENST00000434376 XRCC4Q13426 336 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 PKN2Q16513 984 aaKnown RBP16.32■□□□□ 0.2
SCARF1-203ENST00000434376 CCL14Q16627 93 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 GRK7Q8WTQ7 553 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 SLCO1B3Q9NPD5 702 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 PNMA3Q9UL41 463 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 A0A1W2PPM1 405 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 EIF3EP60228 445 aaKnown RBP16.32■□□□□ 0.2
SCARF1-203ENST00000434376 GRIK4Q16099 956 aa16.32■□□□□ 0.2
SCARF1-203ENST00000434376 PPP1R26Q5T8A7 1209 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms