RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
SEMA3F-206ENST00000434342 NKIRAS1Q9NYS0 192 aa12.83□□□□□ -0.36
SEMA3F-206ENST00000434342 SAE1Q9UBE0 346 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-206ENST00000434342 NXF1Q9UBU9 619 aaKnown RBP12.83□□□□□ -0.36
SEMA3F-206ENST00000434342 BARX2Q9UMQ3 279 aaPredicted RBP12.83□□□□□ -0.36
SEMA3F-206ENST00000434342 PCNTO95613 3336 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 RASA4BC9J798 803 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 RASA4O43374 803 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 PIAS1O75925 651 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 NAMPTP43490 491 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 GPS1Q13098 491 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 KLF1Q13351 362 aaPredicted RBP12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 TXNRD3NBQ6F5E7 133 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 DNAJC24Q6P3W2 148 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 ZNF449Q6P9G9 518 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 C16orf87Q6PH81 154 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 NCCRP1Q6ZVX7 275 aaPredicted RBP12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 THNSL1Q8IYQ7 743 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 LRRC71Q8N4P6 559 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 SMC1BQ8NDV3 1235 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 VPS37BQ9H9H4 285 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 SCINQ9Y6U3 715 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 A0A0B4J269 797 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 PSTPIP1O43586 416 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 TPBGLP0DKB5 382 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 MAGEA4P43358 317 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 GALK1P51570 392 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 ARSEP51690 589 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 TRPC3Q13507 836 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 ISLR2Q6UXK2 745 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 NR1H4Q96RI1 486 aaPredicted RBP12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 SRPK1Q96SB4 655 aaKnown RBP12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 NMRK1Q9NWW6 199 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 TMEM98Q9Y2Y6 226 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 NVLO15381 856 aaKnown RBP12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 SNX3O60493 162 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 PEX11AO75192 247 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 LDHAP00338 332 aaKnown RBP12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 KRT19P08727 400 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 GNAZP19086 355 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 SERPINB3P29508 390 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 SMTNL2Q2TAL5 461 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 FAM182AQ5T1J6 154 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 SYDE1Q6ZW31 735 aaPredicted RBP12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 DPH6Q7L8W6 267 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 APBB1IPQ7Z5R6 666 aaPredicted RBP12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 FITM2Q8N6M3 262 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 EXD1Q8NHP7 514 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 DHRS1Q96LJ7 313 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 CGRRF1Q99675 332 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 DHX33Q9H6R0 707 aaKnown RBP12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 NEU2Q9Y3R4 380 aa12.82□□□□□ -0.36
SEMA3F-206ENST00000434342 EXOC1LA0A1B0GW35 172 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 SGK1O00141 431 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 TBXAS1P24557 533 aaPredicted RBP12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 STAT5BP51692 787 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 CAV1Q03135 178 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 ORC1Q13415 861 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 CAPSQ13938 189 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 BTG3Q14201 252 aaPredicted RBP12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 PLEKHA7Q6IQ23 1121 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 GPAT2Q6NUI2 795 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 TRIM72Q6ZMU5 477 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 ZBTB8BQ8NAP8 495 aaPredicted RBP12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 STK32AQ8WU08 396 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 TGS1Q96RS0 853 aaKnown RBP12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 SIKE1Q9BRV8 207 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 TMEM121Q9BTD3 319 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 HOXC10Q9NYD6 342 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 IP6K2Q9UHH9 426 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 TMCO1Q9UM00 188 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 NFKBIEO00221 500 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 CDH16O75309 829 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 KRT15P19012 456 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 ZNF280AP59817 542 aaPredicted RBP12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 FASTKD3Q14CZ7 662 aaKnown RBP12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 SLC44A4Q53GD3 710 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 KCNT1Q5JUK3 1230 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 CATSPERGQ6ZRH7 1159 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 MAP7D3Q8IWC1 876 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 KATNAL2Q8IYT4 538 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 RNF149Q8NC42 400 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 WDR60Q8WVS4 1066 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 UTP4Q969X6 686 aaKnown RBP12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 NRBP2Q9NSY0 501 aa12.81□□□□□ -0.36
SEMA3F-206ENST00000434342 NFASCO94856 1347 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 MLH1P40692 756 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 CLDN10P78369 228 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 EAPPQ56P03 285 aaPredicted RBP12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 TNFAIP8L3Q5GJ75 292 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 DPY19L2Q6NUT2 758 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 CCDC80Q76M96 950 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 PHF13Q86YI8 300 aaPredicted RBP12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 ATP11CQ8NB49 1132 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 CLIP3Q96DZ5 547 aa12.8□□□□□ -0.36
SEMA3F-206ENST00000434342 PFDN4Q9NQP4 134 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms