RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 ZFYVE19Q96K21 471 aa23.63■■□□□ 1.37
SEMA3B-205ENST00000434030 DPEP3Q9H4B8 488 aa23.63■■□□□ 1.37
SEMA3B-205ENST00000434030 SOBPA7XYQ1 873 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 A8MXQ7 604 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 IKBKBO14920 756 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 AVPR1AP37288 418 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 GRIK1P39086 918 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 MAGEA9P43362 315 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 MLLT6P55198 1093 aaPredicted RBP23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 CDH8P55286 799 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 ZNF667Q5HYK9 610 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 SV2AQ7L0J3 742 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 FRMD5Q7Z6J6 570 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 MON1AQ86VX9 555 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 ENGASEQ8NFI3 743 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 FAM3CQ92520 227 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 SPATA17Q96L03 361 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 SMYD3Q9H7B4 428 aa23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 NDRG2Q9UN36 371 aaKnown RBP23.62■■□□□ 1.37
SEMA3B-205ENST00000434030 AKAP3O75969 853 aa23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 RPS9P46781 194 aaKnown RBP23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 VAMP7P51809 220 aa23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 SGSM1Q2NKQ1 1148 aa23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 MAML2Q8IZL2 1156 aaPredicted RBP23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 B3GALNT2Q8NCR0 500 aa23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 USP13Q92995 863 aaPredicted RBP23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 CEP295NLQ96MC4 621 aa23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 SPATA6Q9NWH7 488 aaPredicted RBP23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 CCL26Q9Y258 94 aa23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 DMDP11532 3685 aa23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 VPS13AQ96RL7 3174 aa23.61■■□□□ 1.37
SEMA3B-205ENST00000434030 GFRA3O60609 400 aa23.6■■□□□ 1.37
SEMA3B-205ENST00000434030 CCNE1P24864 410 aa23.6■■□□□ 1.37
SEMA3B-205ENST00000434030 RPL13P26373 211 aaKnown RBP23.6■■□□□ 1.37
SEMA3B-205ENST00000434030 RAP1GAPP47736 663 aa23.6■■□□□ 1.37
SEMA3B-205ENST00000434030 ADAM9Q13443 819 aa23.6■■□□□ 1.37
SEMA3B-205ENST00000434030 ZCWPW2Q504Y3 356 aa23.6■■□□□ 1.37
SEMA3B-205ENST00000434030 SMYD4Q8IYR2 804 aaPredicted RBP23.6■■□□□ 1.37
SEMA3B-205ENST00000434030 SDCBP2Q9H190 292 aa23.6■■□□□ 1.37
SEMA3B-205ENST00000434030 TDP1Q9NUW8 608 aa23.6■■□□□ 1.37
SEMA3B-205ENST00000434030 GTSE1Q9NYZ3 720 aa23.6■■□□□ 1.37
SEMA3B-205ENST00000434030 TRIM66O15016 1216 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 CLSTN1O94985 981 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 SP9P0CG40 484 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 ANXA13P27216 316 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 SOX9P48436 509 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 KPNA1P52294 538 aaPredicted RBP23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 PLCB2Q00722 1185 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 FAM160A1Q05DH4 1040 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 SCARA5Q6ZMJ2 495 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 DENND5BQ6ZUT9 1274 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 INTS8Q75QN2 995 aaKnown RBP23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 ASCL5Q7RTU5 278 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 B3GNT5Q9BYG0 378 aa23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 C8orf33Q9H7E9 229 aaPredicted RBP23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 THG1LQ9NWX6 298 aaKnown RBP23.59■■□□□ 1.37
SEMA3B-205ENST00000434030 F8VP50 259 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 LAMTOR5O43504 91 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 PSMC2P35998 433 aaKnown RBP23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 USP46P62068 366 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 FAM186BQ8IYM0 893 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 TTC8Q8TAM2 541 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 TAF4BQ92750 862 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 MSANTD3Q96H12 275 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 C8orf48Q96LL4 319 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 GSDMAQ96QA5 445 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 SLC22A12Q96S37 553 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 CYP2S1Q96SQ9 504 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 KIF9Q9HAQ2 790 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 GKN1Q9NS71 199 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 TMEM30AQ9NV96 361 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 RMND1Q9NWS8 449 aa23.58■■□□□ 1.37
SEMA3B-205ENST00000434030 ATG2BQ96BY7 2078 aa23.58■■□□□ 1.36
SEMA3B-205ENST00000434030 CLDN5O00501 218 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 ASS1P00966 412 aaKnown RBP23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 HLA-DRAP01903 254 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 TRIM49P0CI25 452 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 TRIM49CP0CI26 452 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 KRT13P13646 458 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 P4HA1P13674 534 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 PRCPP42785 496 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 CACNA2D1P54289 1103 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 ENPEPQ07075 957 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 TNK2Q07912 1038 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 ZNF268Q14587 947 aaPredicted RBP23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 EDRF1Q3B7T1 1238 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 RIN3Q8TB24 985 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 NKD2Q969F2 451 aaPredicted RBP23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 TIGD1Q96MW7 591 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 FAM83CQ9BQN1 747 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 TTLL2Q9BWV7 592 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 ZNF518BQ9C0D4 1074 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 ELOVL4Q9GZR5 314 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 LMAN1LQ9HAT1 526 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 TRPC7Q9HCX4 862 aa23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 ZFHX2Q9C0A1 2572 aaPredicted RBP23.57■■□□□ 1.36
SEMA3B-205ENST00000434030 PRR23AA6NEV1 266 aa23.56■■□□□ 1.36
SEMA3B-205ENST00000434030 SPECC1L-ADORA2AF8WAN1 911 aa23.56■■□□□ 1.36
SEMA3B-205ENST00000434030 CHRNB1P11230 501 aa23.56■■□□□ 1.36
SEMA3B-205ENST00000434030 CTHP32929 405 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms