RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 CHSY1Q86X52 802 aa14.33□□□□□ -0.12
COL6A3-207ENST00000433762 PDIK1LQ8N165 341 aa14.33□□□□□ -0.12
COL6A3-207ENST00000433762 AGAP11Q8TF27 550 aa14.33□□□□□ -0.12
COL6A3-207ENST00000433762 RSAD2Q8WXG1 361 aa14.33□□□□□ -0.12
COL6A3-207ENST00000433762 MCRS1Q96EZ8 462 aa14.33□□□□□ -0.12
COL6A3-207ENST00000433762 TCHPQ9BT92 498 aa14.33□□□□□ -0.12
COL6A3-207ENST00000433762 LOC102724159A0A0B4J2E5 919 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 FOXO6A8MYZ6 492 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 FZD9O00144 591 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 ETS1P14921 441 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 RFC1P35251 1148 aaPredicted RBP14.32□□□□□ -0.12
COL6A3-207ENST00000433762 DNAJC3Q13217 504 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 PWP2Q15269 919 aaKnown RBP14.32□□□□□ -0.12
COL6A3-207ENST00000433762 SEPT14Q6ZU15 432 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 PRUNE1Q86TP1 453 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 SLC4A11Q8NBS3 891 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 USP6NLQ92738 828 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 MYLK2Q9H1R3 596 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 TLE6Q9H808 572 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 PNPLA8Q9NP80 782 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 LNPEPQ9UIQ6 1025 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 CHKBQ9Y259 395 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 TNFSF13BQ9Y275 285 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.32□□□□□ -0.12
COL6A3-207ENST00000433762 NFKBIEO00221 500 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 MCF2LO15068 1137 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 CST8O60676 142 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 SPAG7O75391 227 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 TGDSO95455 350 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 TROVE2P10155 538 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL6A3-207ENST00000433762 RPL22P35268 128 aaKnown RBP14.32□□□□□ -0.12
COL6A3-207ENST00000433762 TCF7P36402 384 aaPredicted RBP14.32□□□□□ -0.12
COL6A3-207ENST00000433762 CRYMQ14894 314 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 FAM47CQ5HY64 1035 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 ZNF667Q5HYK9 610 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 DENND1BQ6P3S1 775 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 SAMD7Q7Z3H4 446 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 XYLT1Q86Y38 959 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 ZNF75CPQ92670 426 aaPredicted RBP14.32□□□□□ -0.12
COL6A3-207ENST00000433762 CYTH2Q99418 400 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 ETNK1Q9HBU6 452 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 ASNSD1Q9NWL6 643 aa14.32□□□□□ -0.12
COL6A3-207ENST00000433762 CFAP69A5D8W1 941 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 STAU1O95793 577 aaKnown RBP14.31□□□□□ -0.12
COL6A3-207ENST00000433762 IFNB1P01574 187 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 HMGCRP04035 888 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 SSTR3P32745 418 aaPredicted RBP14.31□□□□□ -0.12
COL6A3-207ENST00000433762 PSMC1P62191 440 aaKnown RBP14.31□□□□□ -0.12
COL6A3-207ENST00000433762 PDE4CQ08493 712 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 TFDP2Q14188 446 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 E2F5Q15329 346 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 SLC1A5Q15758 541 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 FAM187BQ17R55 369 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 FAM47EQ6ZV65 393 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 PAXIP1Q6ZW49 1069 aaPredicted RBP14.31□□□□□ -0.12
COL6A3-207ENST00000433762 ARFGAP1Q8N6T3 406 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 BANPQ8N9N5 519 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 ERP27Q96DN0 273 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 PAFAH2Q99487 392 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 MAK16Q9BXY0 300 aaKnown RBP14.31□□□□□ -0.12
COL6A3-207ENST00000433762 SCAF8Q9UPN6 1271 aaKnown RBP14.31□□□□□ -0.12
COL6A3-207ENST00000433762 IQANK1A0A1B0GTG1 560 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 ZNF487B1APH4 448 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 CHADO15335 359 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 RNF8O76064 485 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 ANP32DO95626 131 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 GSTA2P09210 222 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 HARSP12081 509 aaKnown RBP14.31□□□□□ -0.12
COL6A3-207ENST00000433762 P4HA1P13674 534 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 TFAMQ00059 246 aaKnown RBP14.31□□□□□ -0.12
COL6A3-207ENST00000433762 CNTN2Q02246 1040 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 CMPK2Q5EBM0 449 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 WASHC2DQ5SRD0 308 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 ATF7IP2Q5U623 682 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 LVRNQ6Q4G3 990 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 C4orf22Q6V702 233 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 AFG1LQ8WV93 481 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 DCAKDQ8WVC6 231 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 RTP4Q96DX8 246 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 PAIP2Q9BPZ3 127 aaKnown RBP14.31□□□□□ -0.12
COL6A3-207ENST00000433762 KIAA1257Q9ULG3 409 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 GRID1Q9ULK0 1009 aa14.31□□□□□ -0.12
COL6A3-207ENST00000433762 KIF1CO43896 1103 aaKnown RBP14.3□□□□□ -0.12
COL6A3-207ENST00000433762 DHRS4L1P0CG22 281 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 KRT4P19013 534 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 IL1R2P27930 398 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 RAD23BP54727 409 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 TNFAIP2Q03169 654 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 NOMO1Q15155 1222 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 CYP4A22Q5TCH4 519 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 FAM91A1Q658Y4 838 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 C3orf62Q6ZUJ4 267 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 ZBTB33Q86T24 672 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 IFNLR1Q8IU57 520 aaPredicted RBP14.3□□□□□ -0.12
COL6A3-207ENST00000433762 ZNF276Q8N554 614 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 RNF149Q8NC42 400 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 N4BP2L2Q92802 583 aaPredicted RBP14.3□□□□□ -0.12
COL6A3-207ENST00000433762 GGT7Q9UJ14 662 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 TTLL13PA6NNM8 815 aa14.3□□□□□ -0.12
COL6A3-207ENST00000433762 ZBTB42B2RXF5 422 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms