RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 SLC4A5Q9BY07 1137 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 MRPL9Q9BYD2 267 aaKnown RBP11.15□□□□□ -0.62
NEFM-202ENST00000433454 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.15□□□□□ -0.62
NEFM-202ENST00000433454 TULP2O00295 520 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 TKTP29401 623 aaKnown RBP11.15□□□□□ -0.62
NEFM-202ENST00000433454 PEX5P50542 639 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 C2orf54Q08AI8 447 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 PIGHQ14442 188 aaPredicted RBP11.15□□□□□ -0.62
NEFM-202ENST00000433454 CLUL1Q15846 466 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 CNKSR3Q6P9H4 555 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 TMEM110Q86TL2 294 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 CPNE8Q86YQ8 564 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 FUKQ8N0W3 1084 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 GPR161Q8N6U8 529 aaKnown RBP11.15□□□□□ -0.62
NEFM-202ENST00000433454 FNIP1Q8TF40 1166 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 RNPC3Q96LT9 517 aaKnown RBP11.15□□□□□ -0.62
NEFM-202ENST00000433454 CASD1Q96PB1 797 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 CRTAC1Q9NQ79 661 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 CYLDQ9NQC7 956 aa11.15□□□□□ -0.62
NEFM-202ENST00000433454 METTL5Q9NRN9 209 aaKnown RBP11.15□□□□□ -0.62
NEFM-202ENST00000433454 TTC7AQ9ULT0 858 aaPredicted RBP11.15□□□□□ -0.62
NEFM-202ENST00000433454 F8W810 466 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 PSTPIP1O43586 416 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 TRAPPC3O43617 180 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 TYMPP19971 482 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 RFC1P35251 1148 aaPredicted RBP11.14□□□□□ -0.63
NEFM-202ENST00000433454 PLA2G4AP47712 749 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 RWDD2BP57060 319 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 RNASE9P60153 205 aaKnown RBP11.14□□□□□ -0.63
NEFM-202ENST00000433454 PLCB3Q01970 1234 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 IKBKEQ14164 716 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 KIAA0319Q5VV43 1072 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 OVOS1Q6IE37 1185 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 OR6B2Q6IFH4 312 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 FAM183BPQ6ZVS7 135 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 ZDHHC17Q8IUH5 632 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 CRIPAKQ8N1N5 446 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 NIPA2Q8N8Q9 360 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 NAP1L3Q99457 506 aaPredicted RBP11.14□□□□□ -0.63
NEFM-202ENST00000433454 ACBD6Q9BR61 282 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 MED10Q9BTT4 135 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 PLVAPQ9BX97 442 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 DNAJB4Q9UDY4 337 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 PCDHB8Q9UN66 801 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 PRG3Q9Y2Y8 225 aaPredicted RBP11.14□□□□□ -0.63
NEFM-202ENST00000433454 MKI67P46013 3256 aaKnown RBP11.14□□□□□ -0.63
NEFM-202ENST00000433454 PIK3R2O00459 728 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 XPO1O14980 1071 aaKnown RBP11.14□□□□□ -0.63
NEFM-202ENST00000433454 NPR3P17342 541 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 GATMP50440 423 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 ZNF252P-AS1Q0IIN9 211 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 CCDC142Q17RM4 750 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 SEL1L2Q5TEA6 688 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 RHOT1Q8IXI2 618 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 THEM5Q8N1Q8 247 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 MYCBPAPQ8TBZ2 947 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 HSFY1Q96LI6 401 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 DUSP16Q9BY84 665 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 KRT82Q9NSB4 513 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 USTQ9Y2C2 406 aa11.14□□□□□ -0.63
NEFM-202ENST00000433454 FGGP02679 453 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 FAM200BP0CF97 657 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 PSMA2P25787 234 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 SSR1P43307 286 aaKnown RBP11.13□□□□□ -0.63
NEFM-202ENST00000433454 ACADSBP45954 432 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 OGDHQ02218 1023 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 YWHAHQ04917 246 aaPredicted RBP11.13□□□□□ -0.63
NEFM-202ENST00000433454 ZNF211Q13398 564 aaPredicted RBP11.13□□□□□ -0.63
NEFM-202ENST00000433454 CCDC70Q6NSX1 233 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 OLFML1Q6UWY5 402 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 LRRC43Q8N309 656 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 JOSD2Q8TAC2 188 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 PCED1BQ96HM7 432 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 RTP3Q9BQQ7 232 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 PRDM5Q9NQX1 630 aaPredicted RBP11.13□□□□□ -0.63
NEFM-202ENST00000433454 RBM12Q9NTZ6 932 aaKnown RBP11.13□□□□□ -0.63
NEFM-202ENST00000433454 MYBPHLA2RUH7 354 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 CLDN5O00501 218 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 TADA2AO75478 443 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 RPL34P49207 117 aaKnown RBP11.13□□□□□ -0.63
NEFM-202ENST00000433454 TSPY1Q01534 308 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 MAPRE1Q15691 268 aaKnown RBP11.13□□□□□ -0.63
NEFM-202ENST00000433454 INTS6LQ5JSJ4 861 aaKnown RBP11.13□□□□□ -0.63
NEFM-202ENST00000433454 DAB2IPQ5VWQ8 1189 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 PAQR9Q6ZVX9 377 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 FAM35AQ86V20 835 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 MMGT1Q8N4V1 131 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 EMC1Q8N766 993 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 B3GNT5Q9BYG0 378 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 NRDE2Q9H7Z3 1164 aa11.13□□□□□ -0.63
NEFM-202ENST00000433454 FNDC1Q4ZHG4 1894 aaPredicted RBP11.13□□□□□ -0.63
NEFM-202ENST00000433454 TBKBP1A7MCY6 615 aa11.12□□□□□ -0.63
NEFM-202ENST00000433454 F8VP50 259 aa11.12□□□□□ -0.63
NEFM-202ENST00000433454 KRIT1O00522 736 aa11.12□□□□□ -0.63
NEFM-202ENST00000433454 PAPSS1O43252 624 aaPredicted RBP11.12□□□□□ -0.63
NEFM-202ENST00000433454 TIMP1P01033 207 aa11.12□□□□□ -0.63
NEFM-202ENST00000433454 RHOXF2BP0C7M4 288 aa11.12□□□□□ -0.63
NEFM-202ENST00000433454 SLC6A3Q01959 620 aa11.12□□□□□ -0.63
NEFM-202ENST00000433454 LONRF2Q1L5Z9 754 aa11.12□□□□□ -0.63
NEFM-202ENST00000433454 CC2D1AQ6P1N0 951 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms