RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 CREMQ03060 361 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 CENPCQ03188 943 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 UGT3A1Q6NUS8 523 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 CCDC149Q6ZUS6 474 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 OTOP1Q7RTM1 612 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 ENGASEQ8NFI3 743 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 LRRC37BQ96QE4 947 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 RBM15Q96T37 977 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 ELOVL4Q9GZR5 314 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 ATXN3LQ9H3M9 355 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 CISHQ9NSE2 258 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 BARX2Q9UMQ3 279 aaPredicted RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 FAM50BQ9Y247 325 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 CYP3A4P08684 503 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 UBA1P22314 1058 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 FDFT1P37268 417 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 SH3BGRP55822 239 aaPredicted RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 MAP3K7CLP57077 242 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 EFTUD2Q15029 972 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 FRMD8P1Q9BZ68 369 aaPredicted RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 FAM129AQ9BZQ8 928 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 NDE1Q9NXR1 346 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 XPO7Q9UIA9 1087 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 AAR2Q9Y312 384 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 CHRM3P20309 590 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 VCPP55072 806 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 FAM110CQ1W6H9 321 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 MRNIPQ6NTE8 343 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 CSGALNACT1Q8TDX6 532 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 RMDN2Q96LZ7 410 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 CNPY3Q9BT09 278 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 C20orf96Q9NUD7 363 aaPredicted RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 INTS13Q9NVM9 706 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 PSD3Q9NYI0 1048 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 ZNF185O15231 689 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 SUPT3HO75486 399 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 PGK1P00558 417 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 GZMAP12544 262 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 TKTL1P51854 596 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 HNRNPH2P55795 449 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 ABCE1P61221 599 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 VSNL1P62760 191 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 PPP2R2AP63151 447 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 SMTNL2Q2TAL5 461 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 TEDDM1Q5T9Z0 273 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 SV2AQ7L0J3 742 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 NECAB2Q7Z6G3 386 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 CERS5Q8N5B7 392 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 VGLL2Q8N8G2 317 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 COG1Q8WTW3 980 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 KLRG1Q96E93 195 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 MRPL17Q9NRX2 175 aaKnown RBP11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 FZD1Q9UP38 647 aa11.3□□□□□ -0.6
CCDC144CP-202ENST00000433419 CCDC85CA6NKD9 419 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 RPSAP08865 295 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 EIF4BP23588 611 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 YWHAQP27348 245 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 ATXN3P54252 364 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 RHOAP61586 193 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 COBLL1Q53SF7 1204 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 LRRC1Q9BTT6 524 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 ZCCHC17Q9NP64 241 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 DMAP1Q9NPF5 467 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 PPP1R3GB7ZBB8 358 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 FOXN3O00409 490 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 CHUKO15111 745 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 EFCAB14O75071 495 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 PMPCBO75439 489 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 HMGCRP04035 888 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 ZBTB48P10074 688 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 CCR1P32246 355 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 RFC1P35251 1148 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 INPP1P49441 399 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 FLT3LGP49771 235 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 SMAD1Q15797 465 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 HIST2H2ACQ16777 129 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 ACBD5Q5T8D3 534 aaPredicted RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 HIST2H2AA3Q6FI13 130 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 HOMEZQ8IX15 550 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 TMEM86AQ8N2M4 240 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 FBXL16Q8N461 479 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 ELMO2Q96JJ3 720 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 DCLK3Q9C098 648 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 MFSD1Q9H3U5 465 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 MLXIPLQ9NP71 852 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 FBXL5Q9UKA1 691 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 NEU2Q9Y3R4 380 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 SPDYE5A6NIY4 337 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 FAM86B1E9PN63 330 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 FAM86B2P0C5J1 330 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 AKAP5P24588 427 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 NTRK3Q16288 839 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 TRMT10CQ7L0Y3 403 aaKnown RBP11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 DSG4Q86SJ6 1040 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 FIBCD1Q8N539 461 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 TAS1R2Q8TE23 839 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 TRAPPC12Q8WVT3 735 aa11.29□□□□□ -0.6
CCDC144CP-202ENST00000433419 RUBCNQ92622 972 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms