RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 DGKEP52429 567 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 RABGGTBP53611 331 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 NPY5RQ15761 445 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 CSRP2Q16527 193 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 SLC5A9Q2M3M2 681 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 CERCAMQ5T4B2 595 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 ATPAF1Q5TC12 328 aaPredicted RBP6.94□□□□□ -1.3
USP54-206ENST00000433394 RINLQ6ZS11 566 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 HTR3DQ70Z44 454 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 SIAH1Q8IUQ4 282 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 RASGRP3Q8IV61 690 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 CCDC28AQ8IWP9 274 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 ZNF808Q8N4W9 903 aaPredicted RBP6.94□□□□□ -1.3
USP54-206ENST00000433394 TEX19Q8NA77 164 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 EVI5LQ96CN4 794 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 RNF31Q96EP0 1072 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 TBATAQ96M53 351 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 TEPSINQ96N21 525 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 DEF6Q9H4E7 631 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 SAYSD1Q9NPB0 183 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 GRHPRQ9UBQ7 328 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 DKK4Q9UBT3 224 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 LZTS1Q9Y250 596 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 HPSEQ9Y251 543 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 TBC1D30Q9Y2I9 924 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 AATKQ6ZMQ8 1374 aa6.94□□□□□ -1.3
USP54-206ENST00000433394 A0A0B4J269 797 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 A0A1W2PS29 197 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 GAGE12BA1L429 117 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 GAGE12HA6NDE8 117 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 AQP12BA6NM10 295 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 RNASET2O00584 256 aaKnown RBP6.93□□□□□ -1.3
USP54-206ENST00000433394 DCLK1O15075 740 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 VIPP01282 170 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 ITGA5P08648 1049 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 SRGAP2BP0DMP2 458 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 GALNT1Q10472 559 aaPredicted RBP6.93□□□□□ -1.3
USP54-206ENST00000433394 GPS1Q13098 491 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 TUBB3Q13509 450 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 DYRK1AQ13627 763 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 TIGD6Q17RP2 521 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 ZNF750Q32MQ0 723 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 ARHGAP40Q5TG30 622 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 ICE2Q659A1 982 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 FCRL6Q6DN72 434 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 MICALCLQ6ZW33 695 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 LIMS2Q7Z4I7 341 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 CPT1CQ8TCG5 803 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 ABHD5Q8WTS1 349 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 EID2BQ96D98 161 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 RBM15Q96T37 977 aaKnown RBP eCLIP6.93□□□□□ -1.3
USP54-206ENST00000433394 ZSWIM1Q9BR11 485 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 KATNAL1Q9BW62 490 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 SORBS1Q9BX66 1292 aaKnown RBP6.93□□□□□ -1.3
USP54-206ENST00000433394 SEPSECSQ9HD40 501 aaKnown RBP6.93□□□□□ -1.3
USP54-206ENST00000433394 DNAJB11Q9UBS4 358 aa6.93□□□□□ -1.3
USP54-206ENST00000433394 PATE3B3GLJ2 98 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 M0R3H8 397 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 GPR42O15529 346 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 ASNA1O43681 348 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 NPPBP16860 134 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 SLC5A2P31639 672 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 OCA2Q04671 838 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 MYO1EQ12965 1108 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 CCNIQ14094 377 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 POSTNQ15063 836 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 ARHGAP15Q53QZ3 475 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 SPTY2D1Q68D10 685 aaPredicted RBP6.92□□□□□ -1.3
USP54-206ENST00000433394 RGS7BPQ6MZT1 257 aaPredicted RBP6.92□□□□□ -1.3
USP54-206ENST00000433394 MAMDC4Q6UXC1 1216 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 Q6ZRM9 215 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 USP49Q70CQ1 688 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 NRSN1Q8IZ57 195 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 STYXQ8WUJ0 223 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 WDR60Q8WVS4 1066 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 ATRIPQ8WXE1 791 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 TMEM125Q96AQ2 219 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 KCNC2Q96PR1 638 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 GDF15Q99988 308 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 GALNT9Q9HCQ5 603 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 MRPS18AQ9NVS2 196 aaKnown RBP6.92□□□□□ -1.3
USP54-206ENST00000433394 CTTNBP2NLQ9P2B4 639 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 DNMT3BQ9UBC3 853 aaKnown RBP6.92□□□□□ -1.3
USP54-206ENST00000433394 HSFX1Q9UBD0 423 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 XDHP47989 1333 aa6.92□□□□□ -1.3
USP54-206ENST00000433394 TRGV11A0A075B6L2 103 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 OTOL1A6NHN0 477 aaPredicted RBP6.91□□□□□ -1.3
USP54-206ENST00000433394 FCHO1O14526 889 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 SUN1O94901 812 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 KCNA3P22001 575 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 EPHA3P29320 983 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 PAPOLAP51003 745 aaKnown RBP6.91□□□□□ -1.3
USP54-206ENST00000433394 PDE6CP51160 858 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 ZNF134P52741 427 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 KCNAB1Q14722 419 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 TRIM71Q2Q1W2 868 aaKnown RBP6.91□□□□□ -1.3
USP54-206ENST00000433394 PDCD4Q53EL6 469 aaKnown RBP6.91□□□□□ -1.3
USP54-206ENST00000433394 C1QL3Q5VWW1 255 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 KIAA0408Q6ZU52 694 aa6.91□□□□□ -1.3
USP54-206ENST00000433394 ZNF280BQ86YH2 543 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms