RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 TNNC2P02585 160 aa24.27■■□□□ 1.48
HOMER3-203ENST00000433218 PDGFRBP09619 1106 aa24.27■■□□□ 1.48
HOMER3-203ENST00000433218 CSH1P0DML2 217 aa24.27■■□□□ 1.48
HOMER3-203ENST00000433218 CSH2P0DML3 217 aa24.27■■□□□ 1.48
HOMER3-203ENST00000433218 AVPR1AP37288 418 aa24.27■■□□□ 1.48
HOMER3-203ENST00000433218 FNTBP49356 437 aa24.27■■□□□ 1.48
HOMER3-203ENST00000433218 CCR3P51677 355 aa24.27■■□□□ 1.48
HOMER3-203ENST00000433218 MLLT6P55198 1093 aaPredicted RBP24.27■■□□□ 1.48
HOMER3-203ENST00000433218 CFAP221Q4G0U5 840 aa24.27■■□□□ 1.48
HOMER3-203ENST00000433218 SPATA2LQ8IUW3 424 aaPredicted RBP24.27■■□□□ 1.48
HOMER3-203ENST00000433218 KIAA0391O15091 583 aaKnown RBP24.26■■□□□ 1.47
HOMER3-203ENST00000433218 KLRC4O43908 158 aa24.26■■□□□ 1.47
HOMER3-203ENST00000433218 BDNFP23560 247 aa24.26■■□□□ 1.47
HOMER3-203ENST00000433218 ITPRIPL2Q3MIP1 535 aa24.26■■□□□ 1.47
HOMER3-203ENST00000433218 HEATR6Q6AI08 1181 aaKnown RBP24.26■■□□□ 1.47
HOMER3-203ENST00000433218 FSTL4Q6MZW2 842 aa24.26■■□□□ 1.47
HOMER3-203ENST00000433218 STXBP4Q6ZWJ1 553 aa24.26■■□□□ 1.47
HOMER3-203ENST00000433218 TRMT2BQ96GJ1 504 aaKnown RBP24.26■■□□□ 1.47
HOMER3-203ENST00000433218 MSANTD3Q96H12 275 aa24.26■■□□□ 1.47
HOMER3-203ENST00000433218 TDP1Q9NUW8 608 aa24.26■■□□□ 1.47
HOMER3-203ENST00000433218 UBE4BO95155 1302 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 ACTN4O43707 911 aaKnown RBP24.25■■□□□ 1.47
HOMER3-203ENST00000433218 TGM1P22735 817 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 PCSK1P29120 753 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 SYKP43405 635 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 LHX1P48742 406 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 MYO1EQ12965 1108 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 USP4Q13107 963 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 PSMD6Q15008 389 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 ZNF77Q15935 545 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 DUOXA2Q1HG44 320 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 BMT2Q1RMZ1 405 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 MON1AQ86VX9 555 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 SPEM1Q8N4L4 309 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 KIAA0895Q8NCT3 520 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 MRPS31Q92665 395 aaKnown RBP24.25■■□□□ 1.47
HOMER3-203ENST00000433218 MYRFLQ96LU7 910 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 FBRSL1Q9HCM7 1045 aaKnown RBP24.25■■□□□ 1.47
HOMER3-203ENST00000433218 SERTAD1Q9UHV2 236 aa24.25■■□□□ 1.47
HOMER3-203ENST00000433218 WARSP23381 471 aaKnown RBP24.24■■□□□ 1.47
HOMER3-203ENST00000433218 CXCL12P48061 93 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 ZXDBP98169 803 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 PLCB2Q00722 1185 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 LRRC32Q14392 662 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 MDH1BQ5I0G3 518 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 MAMSTRQ6ZN01 415 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 CEP57L1Q8IYX8 460 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 SPATA18Q8TC71 538 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 PCED1BQ96HM7 432 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 MMS19Q96T76 1030 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 IER2Q9BTL4 223 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 HPSEQ9Y251 543 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 WNT6Q9Y6F9 365 aa24.24■■□□□ 1.47
HOMER3-203ENST00000433218 MED19A0JLT2 244 aaPredicted RBP24.23■■□□□ 1.47
HOMER3-203ENST00000433218 ANTXRLA6NF34 631 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 TNNI1P19237 187 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 DDX6P26196 483 aaKnown RBP eCLIP24.23■■□□□ 1.47
HOMER3-203ENST00000433218 NDUFA8P51970 172 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 RPL10AP62906 217 aaKnown RBP24.23■■□□□ 1.47
HOMER3-203ENST00000433218 AMPD3Q01432 767 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 CYP27A1Q02318 531 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 RUNX3Q13761 415 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 CLEC17AQ6ZS10 378 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 ARL14EPQ8N8R7 260 aaPredicted RBP24.23■■□□□ 1.47
HOMER3-203ENST00000433218 XXYLT1Q8NBI6 393 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 EZH1Q92800 747 aaPredicted RBP24.23■■□□□ 1.47
HOMER3-203ENST00000433218 FUBP3Q96I24 572 aaKnown RBP eCLIP24.23■■□□□ 1.47
HOMER3-203ENST00000433218 LRRC27Q9C0I9 530 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 XYLT2Q9H1B5 865 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 GOLPH3LQ9H4A5 285 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 MAGEF1Q9HAY2 307 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 GCNT4Q9P109 453 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 CDH9Q9ULB4 789 aa24.23■■□□□ 1.47
HOMER3-203ENST00000433218 HRO43593 1189 aa24.22■■□□□ 1.47
HOMER3-203ENST00000433218 EGFP01133 1207 aa24.22■■□□□ 1.47
HOMER3-203ENST00000433218 RAP1GAPP47736 663 aa24.22■■□□□ 1.47
HOMER3-203ENST00000433218 PXNP49023 591 aaPredicted RBP24.22■■□□□ 1.47
HOMER3-203ENST00000433218 MYL6P60660 151 aa24.22■■□□□ 1.47
HOMER3-203ENST00000433218 MTF1Q14872 753 aa24.22■■□□□ 1.47
HOMER3-203ENST00000433218 PRR23BQ6ZRT6 265 aa24.22■■□□□ 1.47
HOMER3-203ENST00000433218 FAM126AQ9BYI3 521 aaPredicted RBP24.22■■□□□ 1.47
HOMER3-203ENST00000433218 SMYD3Q9H7B4 428 aa24.22■■□□□ 1.47
HOMER3-203ENST00000433218 USP25Q9UHP3 1055 aa24.22■■□□□ 1.47
HOMER3-203ENST00000433218 MYO18AQ92614 2054 aaKnown RBP24.22■■□□□ 1.47
HOMER3-203ENST00000433218 NUP205Q92621 2012 aa24.21■■□□□ 1.47
HOMER3-203ENST00000433218 FAM237AA0A1B0GTK4 181 aa24.21■■□□□ 1.47
HOMER3-203ENST00000433218 CLDN5O00501 218 aa24.21■■□□□ 1.47
HOMER3-203ENST00000433218 SCAMP3O14828 347 aaKnown RBP24.21■■□□□ 1.47
HOMER3-203ENST00000433218 CKMP06732 381 aa24.21■■□□□ 1.47
HOMER3-203ENST00000433218 MAGEA11P43364 429 aa24.21■■□□□ 1.47
HOMER3-203ENST00000433218 STK4Q13043 487 aa24.21■■□□□ 1.47
HOMER3-203ENST00000433218 SURF1Q15526 300 aa24.21■■□□□ 1.47
HOMER3-203ENST00000433218 RSPO4Q2I0M5 234 aaPredicted RBP24.21■■□□□ 1.47
HOMER3-203ENST00000433218 TMEM196Q5HYL7 178 aa24.21■■□□□ 1.47
HOMER3-203ENST00000433218 TDRD10Q5VZ19 366 aaKnown RBP24.21■■□□□ 1.47
HOMER3-203ENST00000433218 ZNF518BQ9C0D4 1074 aa24.21■■□□□ 1.47
HOMER3-203ENST00000433218 KIF9Q9HAQ2 790 aa24.21■■□□□ 1.47
HOMER3-203ENST00000433218 F8VP50 259 aa24.2■■□□□ 1.46
HOMER3-203ENST00000433218 GOLGA6L22H0YM25 854 aa24.2■■□□□ 1.46
HOMER3-203ENST00000433218 ZNF268Q14587 947 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms