RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 FAM171BQ6P995 826 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 OSTM1Q86WC4 334 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 SCN4BQ8IWT1 228 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 TTC16Q8NEE8 873 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 ANKRD36BP1Q96IX9 119 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 CEP295NLQ96MC4 621 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 CYP2S1Q96SQ9 504 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 CBWD1Q9BRT8 395 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 MTMR12Q9C0I1 747 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 PDE11AQ9HCR9 933 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 RXFP3Q9NSD7 469 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 GCNT4Q9P109 453 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 SIX4Q9UIU6 781 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 WNT6Q9Y6F9 365 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 ANK1P16157 1881 aa15.95■□□□□ 0.14
PRKDC-203ENST00000432581 GOLGA8IPA6NC78 632 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 GOLGA8JA6NMD2 632 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 NFATC1O95644 943 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 PFKLP17858 780 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 PMLP29590 882 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 CASP5P51878 434 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 VSTM1Q6UX27 236 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 C11orf74Q86VG3 221 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 GPD1LQ8N335 351 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 ARL14EPQ8N8R7 260 aaPredicted RBP15.94■□□□□ 0.14
PRKDC-203ENST00000432581 SH3RF2Q8TEC5 729 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 NOC3LQ8WTT2 800 aaKnown RBP15.94■□□□□ 0.14
PRKDC-203ENST00000432581 SPATA17Q96L03 361 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 CLIC6Q96NY7 704 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 SLC22A12Q96S37 553 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 SYT15Q9BQS2 421 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 DUSP15Q9H1R2 295 aaPredicted RBP15.94■□□□□ 0.14
PRKDC-203ENST00000432581 POLR3BQ9NW08 1133 aaPredicted RBP15.94■□□□□ 0.14
PRKDC-203ENST00000432581 MAGEC2Q9UBF1 373 aaPredicted RBP15.94■□□□□ 0.14
PRKDC-203ENST00000432581 CDH9Q9ULB4 789 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 ARHGAP26Q9UNA1 814 aa15.94■□□□□ 0.14
PRKDC-203ENST00000432581 C2orf78A6NCI8 922 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 TNNC2P02585 160 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 HDCP19113 662 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 STAT6P42226 847 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 SHC2P98077 582 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 PSMD2Q13200 908 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 SURF1Q15526 300 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 CCDC142Q17RM4 750 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 N4BP2L1Q5TBK1 243 aaPredicted RBP15.93■□□□□ 0.14
PRKDC-203ENST00000432581 RNF43Q68DV7 783 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 STXBP4Q6ZWJ1 553 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 LIMS2Q7Z4I7 341 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 KIAA1958Q8N8K9 716 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 EZH1Q92800 747 aaPredicted RBP15.93■□□□□ 0.14
PRKDC-203ENST00000432581 HPDLQ96IR7 371 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 LSM14BQ9BX40 385 aaKnown RBP15.93■□□□□ 0.14
PRKDC-203ENST00000432581 PCIF1Q9H4Z3 704 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 PANK4Q9NVE7 773 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 INTS13Q9NVM9 706 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 EHD2Q9NZN4 543 aa15.93■□□□□ 0.14
PRKDC-203ENST00000432581 MORC2Q9Y6X9 1032 aaPredicted RBP15.93■□□□□ 0.14
PRKDC-203ENST00000432581 RALGAPA1Q6GYQ0 2036 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 CEP295Q9C0D2 2601 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 USP24Q9UPU5 2620 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 ZNF233A6NK53 670 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 HCRTO43612 131 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 CREB5Q02930 508 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 DUOXA2Q1HG44 320 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 SCARA3Q6AZY7 606 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 CCDC65Q8IXS2 484 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 TSTD1Q8NFU3 115 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 KBTBD7Q8WVZ9 684 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 FAM84AQ96KN4 292 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 SMOC1Q9H4F8 434 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 TRPM5Q9NZQ8 1165 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 TCHHQ07283 1943 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 GREB1Q4ZG55 1949 aa15.92■□□□□ 0.14
PRKDC-203ENST00000432581 SPAG17Q6Q759 2223 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 BCLAF3A2AJT9 711 aaKnown RBP15.91■□□□□ 0.14
PRKDC-203ENST00000432581 TRIM66O15016 1216 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 DCLK1O15075 740 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 PRPF6O94906 941 aaKnown RBP15.91■□□□□ 0.14
PRKDC-203ENST00000432581 KCNK5O95279 499 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 CAVIN2O95810 425 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 WARSP23381 471 aaKnown RBP15.91■□□□□ 0.14
PRKDC-203ENST00000432581 ANXA13P27216 316 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 GRIK1P39086 918 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 PPP3CCP48454 512 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 DGKEP52429 567 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 PSMC1P62191 440 aaKnown RBP15.91■□□□□ 0.14
PRKDC-203ENST00000432581 CUL4AQ13619 759 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 USP39Q53GS9 565 aaKnown RBP15.91■□□□□ 0.14
PRKDC-203ENST00000432581 LMBRD2Q68DH5 695 aaPredicted RBP15.91■□□□□ 0.14
PRKDC-203ENST00000432581 DENND5BQ6ZUT9 1274 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 USP33Q8TEY7 942 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 MYLPFQ96A32 169 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 FGFBP2Q9BYJ0 223 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 LINC00597Q9H2U6 94 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 KIAA1586Q9HCI6 787 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 ZFHX4Q86UP3 3567 aa15.91■□□□□ 0.14
PRKDC-203ENST00000432581 ATP2C2O75185 946 aa15.9■□□□□ 0.14
PRKDC-203ENST00000432581 BDNFP23560 247 aa15.9■□□□□ 0.14
PRKDC-203ENST00000432581 LMO2P25791 158 aa15.9■□□□□ 0.14
PRKDC-203ENST00000432581 GBP1P32455 592 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms