RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 RNASELQ05823 741 aaKnown RBP8.48□□□□□ -1.05
VTI1A-202ENST00000432306 AP3B2Q13367 1082 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 MTMR1Q13613 665 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 C21orf62-AS1Q17RA5 79 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 CCDC142Q17RM4 750 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 PERM1Q5SV97 790 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 FAM91A1Q658Y4 838 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 SFR1Q86XK3 245 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 DZIP1Q86YF9 867 aaKnown RBP8.48□□□□□ -1.05
VTI1A-202ENST00000432306 NKAPQ8N5F7 415 aaKnown RBP8.48□□□□□ -1.05
VTI1A-202ENST00000432306 BBOF1Q8ND07 529 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 ERMNQ8TAM6 284 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 RIN3Q8TB24 985 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 ETNPPLQ8TBG4 499 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 SH3RF3Q8TEJ3 882 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-202ENST00000432306 TEKT4Q8WW24 435 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 DNAJC9Q8WXX5 260 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 CELF1Q92879 486 aaKnown RBP8.48□□□□□ -1.05
VTI1A-202ENST00000432306 ZBTB10Q96DT7 871 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 CEP95Q96GE4 821 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 LRRC37BQ96QE4 947 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 AGPAT1Q99943 283 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 REEP2Q9BRK0 252 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 POLR3CQ9BUI4 534 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-202ENST00000432306 PLVAPQ9BX97 442 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 UNC93B1Q9H1C4 597 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 MYLK2Q9H1R3 596 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 MMADHCQ9H3L0 296 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-202ENST00000432306 KIAA1586Q9HCI6 787 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 MYOZ2Q9NPC6 264 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 NKIRAS1Q9NYS0 192 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 SEL1LQ9UBV2 794 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 SMG5Q9UPR3 1016 aaKnown RBP8.48□□□□□ -1.05
VTI1A-202ENST00000432306 STK38LQ9Y2H1 464 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 IKBKGQ9Y6K9 419 aa8.48□□□□□ -1.05
VTI1A-202ENST00000432306 FAM47DPA6NHR8 397 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 EDF1O60869 148 aaKnown RBP8.47□□□□□ -1.05
VTI1A-202ENST00000432306 TMCC2O75069 709 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 ZBED4O75132 1171 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 ARIH2O95376 493 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 CYP1A2P05177 515 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 PGRP06401 933 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 CREB1P16220 341 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 KLRK1P26718 216 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 CIITAP33076 1130 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 VHLP40337 213 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 SLCO1A2P46721 670 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 GTF2A2P52657 109 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 SH3BGRP55822 239 aaPredicted RBP8.47□□□□□ -1.05
VTI1A-202ENST00000432306 RPS8P62241 208 aaKnown RBP8.47□□□□□ -1.05
VTI1A-202ENST00000432306 PFKPQ01813 784 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 GABPAQ06546 454 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 ZNF543Q08ER8 600 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 PRPF4BQ13523 1007 aaKnown RBP8.47□□□□□ -1.05
VTI1A-202ENST00000432306 LRRC14Q15048 493 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 PDK4Q16654 411 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 CTC1Q2NKJ3 1217 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 MTERF2Q49AM1 385 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 GPATCH4Q5T3I0 446 aaKnown RBP8.47□□□□□ -1.05
VTI1A-202ENST00000432306 SWSAP1Q6NVH7 229 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 ZCCHC8Q6NZY4 707 aaKnown RBP8.47□□□□□ -1.05
VTI1A-202ENST00000432306 MOB2Q70IA6 237 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 INTS8Q75QN2 995 aaKnown RBP8.47□□□□□ -1.05
VTI1A-202ENST00000432306 OTOP1Q7RTM1 612 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 ANKS1BQ7Z6G8 1248 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 CATSPER3Q86XQ3 398 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 DNAAF5Q86Y56 855 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 CCDC105Q8IYK2 499 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 SLC44A5Q8NCS7 719 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 GRK7Q8WTQ7 553 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 C10orf82Q8WW14 230 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 PSPC1Q8WXF1 523 aaKnown RBP8.47□□□□□ -1.05
VTI1A-202ENST00000432306 KRT35Q92764 455 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 GATA6Q92908 595 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 SNF8Q96H20 258 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 FAM20AQ96MK3 541 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 TBC1D10AQ9BXI6 508 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 RHOBTB2Q9BYZ6 727 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 PITPNM3Q9BZ71 974 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 CPVLQ9H3G5 476 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 DNAJC18Q9H819 358 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 JMJD4Q9H9V9 463 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 DDX43Q9NXZ2 648 aaKnown RBP8.47□□□□□ -1.05
VTI1A-202ENST00000432306 MTMR4Q9NYA4 1195 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 TMOD4Q9NZQ9 345 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 TBC1D7Q9P0N9 293 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 UVRAGQ9P2Y5 699 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 FETUBQ9UGM5 382 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 GTF3C4Q9UKN8 822 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 MKL2Q9ULH7 1088 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 DNM3Q9UQ16 869 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 TBC1D30Q9Y2I9 924 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 SNX5Q9Y5X3 404 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 SLC4A7Q9Y6M7 1214 aa8.47□□□□□ -1.05
VTI1A-202ENST00000432306 NFASCO94856 1347 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 NPHP3-ACAD11A0A0J9YXS1 232 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 MPHOSPH10O00566 681 aaKnown RBP8.46□□□□□ -1.05
VTI1A-202ENST00000432306 ZBTB5O15062 677 aa8.46□□□□□ -1.05
VTI1A-202ENST00000432306 PPP1R11O60927 126 aaPredicted RBP8.46□□□□□ -1.05
VTI1A-202ENST00000432306 IL1BP01584 269 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms