RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 ROR1Q01973 937 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 ZNF354CQ86Y25 554 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 ZDHHC14Q8IZN3 488 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 TGS1Q96RS0 853 aaKnown RBP11.96□□□□□ -0.49
CLDN4-202ENST00000431918 TXNDC16Q9P2K2 825 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 WDR35Q9P2L0 1181 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 BANF1O75531 89 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 PECAM1P16284 738 aaPredicted RBP11.96□□□□□ -0.49
CLDN4-202ENST00000431918 TFDP2Q14188 446 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 TXNRD3NBQ6F5E7 133 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 KATNAL2Q8IYT4 538 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 C1orf127Q8N9H9 656 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 PDLIM7Q9NR12 457 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 RAB6BQ9NRW1 208 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 NINJ2Q9NZG7 142 aa11.96□□□□□ -0.49
CLDN4-202ENST00000431918 HUS1O60921 280 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 ACO1P21399 889 aaKnown RBP11.96□□□□□ -0.5
CLDN4-202ENST00000431918 GPD1P21695 349 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 DRG2P55039 364 aaKnown RBP11.96□□□□□ -0.5
CLDN4-202ENST00000431918 RBBP5Q15291 538 aaKnown RBP11.96□□□□□ -0.5
CLDN4-202ENST00000431918 HIBCHQ6NVY1 386 aaPredicted RBP11.96□□□□□ -0.5
CLDN4-202ENST00000431918 SCUBE3Q8IX30 993 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 C3orf20Q8ND61 904 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 SLITRK1Q96PX8 696 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 PITPNM3Q9BZ71 974 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 USP18Q9UMW8 372 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 NENFQ9UMX5 172 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 TNFSF13BQ9Y275 285 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 SH3BP1Q9Y3L3 701 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 CNTNAP2Q9UHC6 1331 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 TMEM191CA6NGB0 347 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 E5RJQ4 531 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 MTA2O94776 668 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 APRTP07741 180 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 C6orf222P0C671 652 aaPredicted RBP11.96□□□□□ -0.5
CLDN4-202ENST00000431918 MIPP30301 263 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 TAF1CQ15572 869 aaPredicted RBP11.96□□□□□ -0.5
CLDN4-202ENST00000431918 PLEKHA7Q6IQ23 1121 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 DNAJB3Q8WWF6 145 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 ART4Q93070 314 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 CPXM1Q96SM3 734 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 ZNF518BQ9C0D4 1074 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 ZDHHC18Q9NUE0 388 aa11.96□□□□□ -0.5
CLDN4-202ENST00000431918 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 XPOTO43592 962 aaKnown RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 CREB3O43889 395 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 EIF4BP23588 611 aaKnown RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 IRX4P78413 519 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 MCL1Q07820 350 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 NME3Q13232 169 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 STAT4Q14765 748 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 C3orf62Q6ZUJ4 267 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 TBC1D1Q86TI0 1168 aaPredicted RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 PPM1NQ8N819 430 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 ZNF513Q8N8E2 541 aaPredicted RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 LENG1Q96BZ8 264 aaPredicted RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 MIEF2Q96C03 454 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 SYT17Q9BSW7 474 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 TRABDQ9H4I3 376 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 HMGXB4Q9UGU5 601 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 XPO7Q9UIA9 1087 aaKnown RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 LTBP1Q14766 1721 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 FOCADQ5VW36 1801 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 ATG7O95352 703 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 MT-ND3P03897 115 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 ALDH3A1P30838 453 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 HUNKP57058 714 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 AUHQ13825 339 aaKnown RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 PTK6Q13882 451 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 TTC16Q8NEE8 873 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 DDX20Q9UHI6 824 aaKnown RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 INPP5FQ9Y2H2 1132 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 UTRNP46939 3433 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 SIPA1L1O43166 1804 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 RPSAP08865 295 aaKnown RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 MCF2P10911 925 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 VDRP11473 427 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 ARL4AP40617 200 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 MMRN1Q13201 1228 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 UBAP2Q5T6F2 1119 aaKnown RBP11.95□□□□□ -0.5
CLDN4-202ENST00000431918 SIX6OS1Q8N1H7 587 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 HERPUD2Q9BSE4 406 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 NAALADL1Q9UQQ1 740 aa11.95□□□□□ -0.5
CLDN4-202ENST00000431918 CHUKO15111 745 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 CPP00450 1065 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 HOXC6P09630 235 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 VCPP55072 806 aaKnown RBP11.94□□□□□ -0.5
CLDN4-202ENST00000431918 PARK7Q99497 189 aaKnown RBP11.94□□□□□ -0.5
CLDN4-202ENST00000431918 ROPN1BQ9BZX4 212 aaPredicted RBP11.94□□□□□ -0.5
CLDN4-202ENST00000431918 ROPN1Q9HAT0 212 aaPredicted RBP11.94□□□□□ -0.5
CLDN4-202ENST00000431918 PDE4DIPQ5VU43 2346 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 CREB1P16220 341 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 GTF2A2P52657 109 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 BEX3Q00994 111 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 TARBP2Q15633 366 aaKnown RBP11.94□□□□□ -0.5
CLDN4-202ENST00000431918 QPCTQ16769 361 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 NPNTQ6UXI9 565 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 PLEKHH3Q7Z736 793 aa11.94□□□□□ -0.5
CLDN4-202ENST00000431918 LRRC4CQ9HCJ2 640 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms