RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 NUP210Q8TEM1 1887 aaPredicted RBP15.28■□□□□ 0.04
CSTF3-202ENST00000431742 HELZP42694 1942 aaKnown RBP15.27■□□□□ 0.04
CSTF3-202ENST00000431742 ALDH1A3P47895 512 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 GPR15P49685 360 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 UBASH3AP57075 661 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 JAM2P57087 298 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 RPL10AP62906 217 aaKnown RBP15.27■□□□□ 0.04
CSTF3-202ENST00000431742 DRAP1Q14919 205 aaPredicted RBP15.27■□□□□ 0.04
CSTF3-202ENST00000431742 PUS10Q3MIT2 529 aaKnown RBP15.27■□□□□ 0.04
CSTF3-202ENST00000431742 PPP1R26Q5T8A7 1209 aaPredicted RBP15.27■□□□□ 0.04
CSTF3-202ENST00000431742 FAM71AQ8IYT1 594 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 NEK11Q8NG66 645 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 TFAP2BQ92481 460 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 CYFIP2Q96F07 1278 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 C8orf48Q96LL4 319 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 CEP295NLQ96MC4 621 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 HEXIM2Q96MH2 286 aaKnown RBP15.27■□□□□ 0.04
CSTF3-202ENST00000431742 RIPOR3Q96MK2 946 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 ZSWIM1Q9BR11 485 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 STK33Q9BYT3 514 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 CSNK1G1Q9HCP0 422 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 KRT82Q9NSB4 513 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 IFNKQ9P0W0 207 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 KIAA1257Q9ULG3 409 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 ASB3Q9Y575 518 aa15.27■□□□□ 0.04
CSTF3-202ENST00000431742 F8VZ95 297 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 O00370 1275 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 FOXN3O00409 490 aaPredicted RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 TRIM66O15016 1216 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 PNMA6AP0CW24 399 aaPredicted RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 VDRP11473 427 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 KRT5P13647 590 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 MTHFRP42898 656 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 EPHB3P54753 998 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 EPHA5P54756 1037 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 POLR2FP61218 127 aaKnown RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 CBX2Q14781 532 aaPredicted RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 SMAD2Q15796 467 aaKnown RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 DDR2Q16832 855 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 AAK1Q2M2I8 961 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 SGO2Q562F6 1265 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 PTCRAQ6ISU1 281 aaPredicted RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 TMC8Q8IU68 726 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 ZMIZ2Q8NF64 920 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 ATXN2LQ8WWM7 1075 aaKnown RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 PSMG2Q969U7 264 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 SPATA17Q96L03 361 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 NECTIN4Q96NY8 510 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 SMOQ99835 787 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 MED10Q9BTT4 135 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 LRRC3Q9BY71 257 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 XPO4Q9C0E2 1151 aaKnown RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 WDR6Q9NNW5 1121 aaKnown RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 DMAP1Q9NPF5 467 aaPredicted RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 AVENQ9NQS1 362 aaPredicted RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 HCFC1R1Q9NWW0 138 aa15.26■□□□□ 0.03
CSTF3-202ENST00000431742 DNMT3BQ9UBC3 853 aaKnown RBP15.26■□□□□ 0.03
CSTF3-202ENST00000431742 CLUHO75153 1309 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 F8VP50 259 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 AP1G2O75843 785 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 FAM200BP0CF97 657 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 CD19P15391 556 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 HMGA1P17096 107 aaKnown RBP15.25■□□□□ 0.03
CSTF3-202ENST00000431742 ADORA2BP29275 332 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 GRIK1P39086 918 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 KCNQ1P51787 676 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 RAPGEF1Q13905 1077 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 ATAT1Q5SQI0 421 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 SDHAF4Q5VUM1 108 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 SARM1Q6SZW1 724 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 CLEC20AQ6ZU45 233 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 ITIH5Q86UX2 942 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 TTC30AQ86WT1 665 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 SCN4BQ8IWT1 228 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 ELMOD1Q8N336 334 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 PCMTD1Q96MG8 357 aaPredicted RBP15.25■□□□□ 0.03
CSTF3-202ENST00000431742 TTYH3Q9C0H2 523 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 POMKQ9H5K3 350 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 PIDD1Q9HB75 910 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 TSPAN16Q9UKR8 245 aa15.25■□□□□ 0.03
CSTF3-202ENST00000431742 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.25■□□□□ 0.03
CSTF3-202ENST00000431742 SLC38A8A6NNN8 435 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 CYP26A1O43174 497 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 AP5Z1O43299 807 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 BEST1O76090 585 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 SLC34A2O95436 690 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 CALCAP01258 141 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 RHOP08100 348 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 NPR3P17342 541 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 PTPN2P17706 415 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 BRD2P25440 801 aaKnown RBP15.24■□□□□ 0.03
CSTF3-202ENST00000431742 CLCN1P35523 988 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 NTHL1P78549 312 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 MRPS5P82675 430 aaKnown RBP15.24■□□□□ 0.03
CSTF3-202ENST00000431742 VEPH1Q14D04 833 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 STILQ15468 1287 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 CNGA2Q16280 664 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 MEA1Q16626 185 aa15.24■□□□□ 0.03
CSTF3-202ENST00000431742 GOLGA7BQ2TAP0 167 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms