RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 AGAP11Q8TF27 550 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PPP1R2P1Q96PQ5 205 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PELOQ9BRX2 385 aaKnown RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ESYT1Q9BSJ8 1104 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 WDR26Q9H7D7 661 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 TIMMDC1Q9NPL8 285 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 GLRX2Q9NS18 164 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 NRBP2Q9NSY0 501 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CDV3Q9UKY7 258 aaKnown RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 SLC22A14Q9Y267 594 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 EIF3AQ14152 1382 aaKnown RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PRSS44E7EML9 344 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 GRIN3BO60391 1043 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ECDO95905 644 aaPredicted RBP5.59□□□□□ -1.51
PTPN4-203ENST00000430976 FGFR1P11362 822 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CASP14P31944 242 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 POU3F4P49335 361 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CAPZA1P52907 286 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 SLC26A5P58743 744 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 FCHO2Q0JRZ9 810 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CHAF1BQ13112 559 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 BLMHQ13867 455 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PCGF3Q3KNV8 242 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 XKR5Q6UX68 686 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 PEX26Q7Z412 305 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 S100A7AQ86SG5 101 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 TTC7BQ86TV6 843 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 GPR65Q8IYL9 337 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ZNF454Q8N9F8 522 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 WASF1Q92558 559 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 P3H4Q92791 437 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 RFKQ969G6 155 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 MCUR1Q96AQ8 359 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 MYD88Q99836 296 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 SEC22CQ9BRL7 303 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 TRIM15Q9C019 465 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 CDH19Q9H159 772 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 FAM53CQ9NYF3 392 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 ACTR3BQ9P1U1 418 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 COG5Q9UP83 839 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 GON4LQ3T8J9 2241 aa5.59□□□□□ -1.51
PTPN4-203ENST00000430976 FBP2O00757 339 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF197O14709 1029 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 OPLAHO14841 1288 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 SYN3O14994 580 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 SNAP29O95721 258 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 KRT6AP02538 564 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 KRT6BP04259 564 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 NELFEP18615 380 aaKnown RBP5.59□□□□□ -1.52
PTPN4-203ENST00000430976 TCN1P20061 433 aaPredicted RBP5.59□□□□□ -1.52
PTPN4-203ENST00000430976 POU3F3P20264 500 aaPredicted RBP5.59□□□□□ -1.52
PTPN4-203ENST00000430976 CD40LGP29965 261 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 RXRGP48443 463 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 PITPNBP48739 271 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 RNF144AP50876 292 aaPredicted RBP5.59□□□□□ -1.52
PTPN4-203ENST00000430976 ADCY7P51828 1080 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 PTPAQ15257 358 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 AARDQ4LEZ3 155 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 GPR141Q7Z602 305 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 OR6B3Q8NGW1 331 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 FAM71BQ8TC56 605 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 ATL1Q8WXF7 558 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 HES6Q96HZ4 224 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 ZNF668Q96K58 619 aaPredicted RBP5.59□□□□□ -1.52
PTPN4-203ENST00000430976 CENPKQ9BS16 269 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 RUBCNLQ9H714 662 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 TBC1D23Q9NUY8 699 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 RPH3ALQ9UNE2 315 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 SMG5Q9UPR3 1016 aaKnown RBP5.59□□□□□ -1.52
PTPN4-203ENST00000430976 LRCH1Q9Y2L9 728 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 CNTLNQ9NXG0 1405 aa5.59□□□□□ -1.52
PTPN4-203ENST00000430976 CHD1O14646 1710 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 MRC2Q9UBG0 1479 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 HGSO14964 777 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CIDEAO60543 219 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 EXOC3O60645 756 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 NOS1APO75052 506 aaPredicted RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 DDAH1O94760 285 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ASS1P00966 412 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TPBGLP0DKB5 382 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 RARBP10826 455 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 SDSP20132 328 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 GRK3P35626 688 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 EPHB4P54760 987 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 DRG2P55039 364 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TRA2BP62995 288 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 C1QBPQ07021 282 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 KCNH2Q12809 1159 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TTMPQ5BVD1 217 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 KCNT1Q5JUK3 1230 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 RNASEH2BQ5TBB1 312 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CACHD1Q5VU97 1274 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 PTRHD1Q6GMV3 140 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TPTE2Q6XPS3 522 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 TRIM69Q86WT6 500 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CCDC28AQ8IWP9 274 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 CYP4X1Q8N118 509 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 ARRDC4Q8NCT1 418 aa5.58□□□□□ -1.52
PTPN4-203ENST00000430976 PTCD3Q96EY7 689 aaKnown RBP5.58□□□□□ -1.52
PTPN4-203ENST00000430976 FAM89AQ96GI7 184 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms