RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TAC1P20366 129 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 MMP8P22894 467 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 POLR2BP30876 1174 aaKnown RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 GBP2P32456 591 aaPredicted RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 ICAM3P32942 547 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 SSR1P43307 286 aaKnown RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 ZNF132P52740 706 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 POLGP54098 1239 aaPredicted RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 YARSP54577 528 aaKnown RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 PRKCEQ02156 737 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 BAATQ14032 418 aaPredicted RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 CRYMQ14894 314 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 LRRC14Q15048 493 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 CCDC142Q17RM4 750 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 P3H1Q32P28 736 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 MAP3K21Q5TCX8 1036 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 WDR78Q5VTH9 848 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 TDRD10Q5VZ19 366 aaKnown RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 DCAF15Q66K64 600 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 ZPBP2Q6X784 338 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 ASRGL1Q7L266 308 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 POLNQ7Z5Q5 900 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 TRABD2AQ86V40 505 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 CPNE8Q86YQ8 564 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 SRRM1Q8IYB3 904 aaKnown RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 TCP11Q8WWU5 503 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 ATG4AQ8WYN0 398 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 INPP5DQ92835 1189 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 SLITRK1Q96PX8 696 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 TMEM237Q96Q45 408 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 WRNIP1Q96S55 665 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 C11orf70Q9BRQ4 267 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 PI4K2AQ9BTU6 479 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 KIFC3Q9BVG8 833 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 NIFKQ9BYG3 293 aaKnown RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 PORCNQ9H237 461 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 RPAP3Q9H6T3 665 aaPredicted RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 PCDH9Q9HC56 1237 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 XPNPEP1Q9NQW7 623 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 ABCF3Q9NUQ8 709 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 RBAKQ9NYW8 714 aaPredicted RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 STRIP2Q9ULQ0 834 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 ZNF148Q9UQR1 794 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 R3HDM2Q9Y2K5 976 aaKnown RBP9.15□□□□□ -0.94
GABPB1-205ENST00000429662 CEP83Q9Y592 693 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 CSADQ9Y600 493 aa9.15□□□□□ -0.94
GABPB1-205ENST00000429662 A0A0B4J269 797 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 TMEM150BA6NC51 233 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 C19orf81C9J6K1 198 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 E7ENQ6 273 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 UNC5CO95185 931 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 ZWINTO95229 277 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 ATG7O95352 703 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 VNN1O95497 513 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 ASMTLO95671 621 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 KRT1P04264 644 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 KRT7P08729 469 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 EIF4BP23588 611 aaKnown RBP9.14□□□□□ -0.95
GABPB1-205ENST00000429662 CDH5P33151 784 aaPredicted RBP9.14□□□□□ -0.95
GABPB1-205ENST00000429662 ARL2P36404 184 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 CCNG1P51959 295 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 EFNA5P52803 228 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 VCPP55072 806 aaKnown RBP9.14□□□□□ -0.95
GABPB1-205ENST00000429662 TAS2R40P59535 323 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 ACTR2P61160 394 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 EMC2Q15006 297 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 TRIP13Q15645 432 aaPredicted RBP9.14□□□□□ -0.95
GABPB1-205ENST00000429662 PDK4Q16654 411 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 KLHL38Q2WGJ6 581 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 TFDP3Q5H9I0 405 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 ZNF697Q5TEC3 545 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 DNAJC24Q6P3W2 148 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 TMEM270Q6UE05 265 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 SPOCD1Q6ZMY3 1216 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 TAS1R3Q7RTX0 852 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 WDR49Q8IV35 697 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 UBR7Q8N806 425 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 DENND1AQ8TEH3 1009 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 C12orf42Q96LP6 360 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 HEMGNQ9BXL5 484 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 C11orf49Q9H6J7 331 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 DHX33Q9H6R0 707 aaKnown RBP9.14□□□□□ -0.95
GABPB1-205ENST00000429662 SAYSD1Q9NPB0 183 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.14□□□□□ -0.954e-7■■■■■ 57.7
GABPB1-205ENST00000429662 HOMER2Q9NSB8 354 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 NRBP2Q9NSY0 501 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 WDR35Q9P2L0 1181 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 ZNF112Q9UJU3 913 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 PCDHGC3Q9UN70 934 aa9.14□□□□□ -0.95
GABPB1-205ENST00000429662 MAFBQ9Y5Q3 323 aaPredicted RBP9.14□□□□□ -0.95
GABPB1-205ENST00000429662 TCF20Q9UGU0 1960 aaKnown RBP9.13□□□□□ -0.95
GABPB1-205ENST00000429662 hCG_1818297A0A087WSY0 165 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 TMEM265A0A087WTH1 108 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 MED7O43513 233 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 GAS2O43903 313 aaKnown RBP9.13□□□□□ -0.95
GABPB1-205ENST00000429662 OATP04181 439 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 WEE2P0C1S8 567 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 ATP2A2P16615 1042 aaKnown RBP9.13□□□□□ -0.95
GABPB1-205ENST00000429662 MSH2P43246 934 aa9.13□□□□□ -0.95
GABPB1-205ENST00000429662 ARSEP51690 589 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms