RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 RBBP8NLQ8NC74 664 aaPredicted RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 NEK11Q8NG66 645 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 SLC2A14Q8TDB8 520 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 TRMT2BQ96GJ1 504 aaKnown RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 SEPT5Q99719 369 aaPredicted RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 NUP58Q9BVL2 599 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 LRRC3Q9BY71 257 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 DUSP16Q9BY84 665 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 ZNF518BQ9C0D4 1074 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 PIDD1Q9HB75 910 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 DMAP1Q9NPF5 467 aaPredicted RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 PRDM6Q9NQX0 595 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.86■□□□□ 0.132e-8■■■□□ 16.3
GARNL3-204ENST00000429629 IL37Q9NZH6 218 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 DNMT3BQ9UBC3 853 aaKnown RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 ZMYM5Q9UJ78 669 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 ZFP37Q9Y6Q3 630 aaPredicted RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 CCL16O15467 120 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 SLC34A2O95436 690 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 FAM200BP0CF97 657 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 BMP1P13497 986 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 ATF6P18850 670 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 ANXA13P27216 316 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 GRIK1P39086 918 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 PBX1P40424 430 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 SLC8A3P57103 927 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 PTK2Q05397 1052 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 DRAP1Q14919 205 aaPredicted RBP15.85■□□□□ 0.13
GARNL3-204ENST00000429629 PPP1R26Q5T8A7 1209 aaPredicted RBP15.85■□□□□ 0.13
GARNL3-204ENST00000429629 CYP4A22Q5TCH4 519 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 GJB7Q6PEY0 223 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 TTC9BQ8N6N2 239 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 LPIN3Q9BQK8 851 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 MED10Q9BTT4 135 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 TTLL2Q9BWV7 592 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 PHF7Q9BWX1 381 aaPredicted RBP15.85■□□□□ 0.13
GARNL3-204ENST00000429629 UXTQ9UBK9 157 aaPredicted RBP15.85■□□□□ 0.13
GARNL3-204ENST00000429629 FHOD1Q9Y613 1164 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 REV3LO60673 3130 aa15.85■□□□□ 0.13
GARNL3-204ENST00000429629 XIRP2A4UGR9 3374 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 O00370 1275 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 MED7O43513 233 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 AP1G2O75843 785 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 RHOP08100 348 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 KRT5P13647 590 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 HMGA1P17096 107 aaKnown RBP15.84■□□□□ 0.13
GARNL3-204ENST00000429629 NPR3P17342 541 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 PPP3CCP48454 512 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 JAM2P57087 298 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 POLR2FP61218 127 aaKnown RBP15.84■□□□□ 0.13
GARNL3-204ENST00000429629 APBA1Q02410 837 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 TFF2Q03403 129 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 DDR2Q16832 855 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 ARHGAP44Q17R89 818 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 CCDC142Q17RM4 750 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 PABPC1LQ4VXU2 614 aaKnown RBP15.84■□□□□ 0.13
GARNL3-204ENST00000429629 PKDCCQ504Y2 493 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 DENND5BQ6ZUT9 1274 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 RNF214Q8ND24 703 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 ZNF606Q8WXB4 792 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 GPR88Q9GZN0 384 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 FAM207AQ9NSI2 230 aaPredicted RBP15.84■□□□□ 0.13
GARNL3-204ENST00000429629 HESX1Q9UBX0 185 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 EYSQ5T1H1 3165 aa15.84■□□□□ 0.13
GARNL3-204ENST00000429629 PRUNE2Q8WUY3 3088 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 FAM92AA1XBS5 289 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 SLC38A8A6NNN8 435 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 F8VP50 259 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 F8VZ95 297 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 CLDN5O00501 218 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 TNFRSF10BO14763 440 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 RTN3O95197 1032 aaPredicted RBP15.83■□□□□ 0.12
GARNL3-204ENST00000429629 CCDC172P0C7W6 258 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 SETSIPP0DME0 302 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 CCDC130P13994 396 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 CD19P15391 556 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 CLCN1P35523 988 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 BCAT1P54687 386 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 ORC1Q13415 861 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 TAF12Q16514 161 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 CLEC20AQ6ZU45 233 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 OTOP3Q7RTS5 596 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 GRASPQ7Z6J2 395 aaPredicted RBP15.83■□□□□ 0.12
GARNL3-204ENST00000429629 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.83■□□□□ 0.12
GARNL3-204ENST00000429629 SCN4BQ8IWT1 228 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 NUP93Q8N1F7 819 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 ZMIZ2Q8NF64 920 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 STK32AQ8WU08 396 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 OVCA2Q8WZ82 227 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 TFAP2BQ92481 460 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 PCMTD1Q96MG8 357 aaPredicted RBP15.83■□□□□ 0.12
GARNL3-204ENST00000429629 SMOQ99835 787 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 ASAH2Q9NR71 780 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 FAM49BQ9NUQ9 324 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 IFNKQ9P0W0 207 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 PCDHGC3Q9UN70 934 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.83■□□□□ 0.12
GARNL3-204ENST00000429629 CLUHO75153 1309 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 ITIH6Q6UXX5 1313 aa15.83■□□□□ 0.12
GARNL3-204ENST00000429629 A0A1W2PQJ5 194 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms