RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 DUOXA2Q1HG44 320 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 ZNF667Q5HYK9 610 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 SCARA3Q6AZY7 606 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 PIGWQ7Z7B1 504 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 FAM228AQ86W67 206 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 NETO2Q8NC67 525 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 AGR3Q8TD06 166 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 LPAR1Q92633 364 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 ATXN7L3BQ96GX2 97 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 ANKRD36BP1Q96IX9 119 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 ADPGKQ9BRR6 497 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 ACAD9Q9H845 621 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 RXFP1Q9HBX9 757 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 XPNPEP1Q9NQW7 623 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 ARMCX1Q9P291 453 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 TTLL3Q9Y4R7 772 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 PTPRJQ12913 1337 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 DLEC1Q9Y238 1755 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 CCL15-CCL14A0A0B4J2E2 113 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 ENTPD5O75356 428 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 TOM1L1O75674 476 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 TBXAS1P24557 533 aaPredicted RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 VGLL4Q14135 290 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 SLC1A5Q15758 541 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 CCL15Q16663 113 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 ZACNQ401N2 412 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 DCAF15Q66K64 600 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 NPNTQ6UXI9 565 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 CEP128Q6ZU80 1094 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 NLRP9Q7RTR0 991 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 ATP11CQ8NB49 1132 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 TCP10LQ8TDR4 215 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 PAFAH2Q99487 392 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 OSBPL1AQ9BXW6 950 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 TRIM55Q9BYV6 548 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 KIAA1683Q9H0B3 1180 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 IRAK4Q9NWZ3 460 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 PSMC3IPQ9P2W1 217 aaPredicted RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 GGA2Q9UJY4 613 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 NENFQ9UMX5 172 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 AKT3Q9Y243 479 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 DNALI1O14645 258 aaPredicted RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 AVILO75366 819 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 DCTN3O75935 186 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 HAUS5O94927 633 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 LDHAP00338 332 aaKnown RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 FDX1P10109 184 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 DESP17661 470 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 TAC1P20366 129 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 ARFIP2P53365 341 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 WDR4P57081 412 aaKnown RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 BMPR2Q13873 1038 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 TAF1CQ15572 869 aaPredicted RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 NFIL3Q16649 462 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 LRRC36Q1X8D7 754 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 TSNAXIP1Q2TAA8 658 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 C11orf91Q3C1V1 193 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 SYDE1Q6ZW31 735 aaPredicted RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 LRRC6Q86X45 466 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 LMNTD2Q8IXW0 634 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 EXD1Q8NHP7 514 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 CD101Q93033 1021 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 CDHR1Q96JP9 859 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 TRIM6Q9C030 488 aaPredicted RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 RSPH9Q9H1X1 276 aaPredicted RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 VPS33BQ9H267 617 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 AS3MTQ9HBK9 375 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 A1CFQ9NQ94 594 aaKnown RBP8.44□□□□□ -1.06
HPS4-205ENST00000429411 HEY2Q9UBP5 337 aa8.44□□□□□ -1.06
HPS4-205ENST00000429411 MYPNQ86TC9 1320 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 LAMB2P55268 1798 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 CCDC85CA6NKD9 419 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 COPEO14579 308 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 KCNN4O15554 427 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 PSTPIP1O43586 416 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 ZBED1O96006 694 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 OATP04181 439 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 PRKCBP05771 671 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 CD48P09326 243 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 ZBTB48P10074 688 aaPredicted RBP8.43□□□□□ -1.06
HPS4-205ENST00000429411 TCF3P15923 654 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 GARTP22102 1010 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 GLRA2P23416 452 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 CLCN3P51790 818 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 SARNPP82979 210 aaKnown RBP8.43□□□□□ -1.06
HPS4-205ENST00000429411 MMRN1Q13201 1228 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 PTK7Q13308 1070 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 SIX1Q15475 284 aaPredicted RBP8.43□□□□□ -1.06
HPS4-205ENST00000429411 TFDP3Q5H9I0 405 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 TRIM72Q6ZMU5 477 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 VSIG10LQ86VR7 867 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 PPFIBP2Q8ND30 876 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 ZNF280CQ8ND82 737 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 PHC3Q8NDX5 983 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 FAM149B1Q96BN6 582 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 TTC25Q96NG3 672 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 TEX13BQ9BXU2 312 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 TXLNGYQ9BZA5 131 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 IRF2BPLQ9H1B7 796 aa8.43□□□□□ -1.06
HPS4-205ENST00000429411 FAM49BQ9NUQ9 324 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms