RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 MARCKSL1P49006 195 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 DNA2P51530 1060 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 BCAT1P54687 386 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 HADHBP55084 474 aaKnown RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 HTRA4P83105 476 aaPredicted RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 BST2Q10589 180 aaKnown RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 MAMLD1Q13495 774 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 BTG3Q14201 252 aaPredicted RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 MESDQ14696 234 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 STILQ15468 1287 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 PPP1R15BQ5SWA1 713 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 C9orf50Q5SZB4 431 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 TRNP1Q6NT89 227 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 FAM171BQ6P995 826 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 KCNT2Q6UVM3 1135 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 FAM43BQ6ZT52 329 aaPredicted RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 CLEC20AQ6ZU45 233 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 GPRIN1Q7Z2K8 1008 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 SLFN11Q7Z7L1 901 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 METTL23Q86XA0 190 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 CEP57Q86XR8 500 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 CMTR2Q8IYT2 770 aaKnown RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 RNF168Q8IYW5 571 aaPredicted RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 SLC39A11Q8N1S5 342 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 TXLNBQ8N3L3 684 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 RNF10Q8N5U6 811 aaKnown RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 TTC9BQ8N6N2 239 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 ANKRD52Q8NB46 1076 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 COLGALT1Q8NBJ5 622 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 STKLD1Q8NE28 680 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 MYCBPAPQ8TBZ2 947 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 NDRG1Q92597 394 aaKnown RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 IGSF21Q96ID5 467 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 TNIP3Q96KP6 325 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 PSMB7Q99436 277 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 NAPGQ99747 312 aaPredicted RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 ACBD6Q9BR61 282 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 MED10Q9BTT4 135 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 COLEC11Q9BWP8 271 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 TLR10Q9BXR5 811 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 ABCB6Q9NP58 842 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 ST7Q9NRC1 585 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 METTL5Q9NRN9 209 aaKnown RBP9.38□□□□□ -0.91
SMC6-204ENST00000428868 EHD2Q9NZN4 543 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 ANAPC7Q9UJX3 599 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 DSEQ9UL01 958 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 CEP290O15078 2479 aa9.38□□□□□ -0.91
SMC6-204ENST00000428868 MYO7AQ13402 2215 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 C2orf16Q68DN1 1984 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 SF3B1O75533 1304 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMC6-204ENST00000428868 HHLA1C9JL84 531 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 KIF2AO00139 706 aaPredicted RBP9.37□□□□□ -0.91
SMC6-204ENST00000428868 SYN3O14994 580 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 ZNF185O15231 689 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 PAPSS1O43252 624 aaPredicted RBP9.37□□□□□ -0.91
SMC6-204ENST00000428868 EFCAB14O75071 495 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 AP1G2O75843 785 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 URI1O94763 535 aaPredicted RBP9.37□□□□□ -0.91
SMC6-204ENST00000428868 OAZ2O95190 189 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 GJB5O95377 273 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 CALB1P05937 261 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 LCP1P13796 627 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 TCF4P15884 667 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 RPL17P18621 184 aaKnown RBP9.37□□□□□ -0.91
SMC6-204ENST00000428868 BDNFP23560 247 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 PCSK1P29120 753 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 GPR15P49685 360 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 MAP3K7CLP57077 242 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 PLCB3Q01970 1234 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 YWHAHQ04917 246 aaPredicted RBP9.37□□□□□ -0.91
SMC6-204ENST00000428868 MRPL58Q14197 206 aaKnown RBP9.37□□□□□ -0.91
SMC6-204ENST00000428868 TAF5Q15542 800 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 SLC39A12Q504Y0 691 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 RAB6CQ53S08 254 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 SPOUT1Q5T280 376 aaKnown RBP9.37□□□□□ -0.91
SMC6-204ENST00000428868 MEI1Q5TIA1 1274 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 LIN9Q5TKA1 542 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 FAM109BQ6ICB4 259 aaPredicted RBP9.37□□□□□ -0.91
SMC6-204ENST00000428868 DNAJC24Q6P3W2 148 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 PSRC1Q6PGN9 363 aaPredicted RBP9.37□□□□□ -0.91
SMC6-204ENST00000428868 NT5DC3Q86UY8 548 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 RHOT2Q8IXI1 618 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 EMC1Q8N766 993 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 TRIM58Q8NG06 486 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 KIF18AQ8NI77 898 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 SPATA18Q8TC71 538 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 HERVK_113Q902F9 699 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 MCRS1Q96EZ8 462 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 MCEEQ96PE7 176 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 KCNK16Q96T55 309 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 YME1L1Q96TA2 773 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 DUSP16Q9BY84 665 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 ZCWPW1Q9H0M4 648 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 RAB6CQ9H0N0 254 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 CRISPLD1Q9H336 500 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 SMARCAL1Q9NZC9 954 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 HESX1Q9UBX0 185 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 CEP83Q9Y592 693 aa9.37□□□□□ -0.91
SMC6-204ENST00000428868 SHROOM3Q8TF72 1996 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms