RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 KCNN1Q92952 543 aa8.8□□□□□ -1
CD44-208ENST00000428726 SLCO1B3Q9NPD5 702 aa8.8□□□□□ -1
CD44-208ENST00000428726 ERAP1Q9NZ08 941 aa8.8□□□□□ -1
CD44-208ENST00000428726 FLRT1Q9NZU1 646 aa8.8□□□□□ -1
CD44-208ENST00000428726 SEPT10Q9P0V9 454 aa8.8□□□□□ -1
CD44-208ENST00000428726 BAIAP2L1Q9UHR4 511 aa8.8□□□□□ -1
CD44-208ENST00000428726 TSPAN16Q9UKR8 245 aa8.8□□□□□ -1
CD44-208ENST00000428726 CHMP2BQ9UQN3 213 aa8.8□□□□□ -1
CD44-208ENST00000428726 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.8□□□□□ -1
CD44-208ENST00000428726 TTLL3Q9Y4R7 772 aa8.8□□□□□ -1
CD44-208ENST00000428726 TMEM120BA0PK00 339 aa8.8□□□□□ -1
CD44-208ENST00000428726 C2orf71A6NGG8 1288 aa8.8□□□□□ -1
CD44-208ENST00000428726 F8W810 466 aa8.8□□□□□ -1
CD44-208ENST00000428726 C22orf31O95567 290 aa8.8□□□□□ -1
CD44-208ENST00000428726 CYP1A1P04798 512 aaPredicted RBP8.8□□□□□ -1
CD44-208ENST00000428726 PDGFRAP16234 1089 aa8.8□□□□□ -1
CD44-208ENST00000428726 MMP8P22894 467 aa8.8□□□□□ -1
CD44-208ENST00000428726 RAD23BP54727 409 aa8.8□□□□□ -1
CD44-208ENST00000428726 CLDN10P78369 228 aa8.8□□□□□ -1
CD44-208ENST00000428726 PTP4A2Q12974 167 aa8.8□□□□□ -1
CD44-208ENST00000428726 AUHQ13825 339 aaKnown RBP8.8□□□□□ -1
CD44-208ENST00000428726 BYSLQ13895 437 aaKnown RBP8.8□□□□□ -1
CD44-208ENST00000428726 NUGGCQ68CJ6 796 aa8.8□□□□□ -1
CD44-208ENST00000428726 PMF1Q6P1K2 205 aa8.8□□□□□ -1
CD44-208ENST00000428726 CES3Q6UWW8 571 aa8.8□□□□□ -1
CD44-208ENST00000428726 ARFGAP2Q8N6H7 521 aa8.8□□□□□ -1
CD44-208ENST00000428726 TMEM35BQ8NCS4 154 aa8.8□□□□□ -1
CD44-208ENST00000428726 DEPDC1BQ8WUY9 529 aa8.8□□□□□ -1
CD44-208ENST00000428726 ATXN7L3BQ96GX2 97 aa8.8□□□□□ -1
CD44-208ENST00000428726 ADPGKQ9BRR6 497 aa8.8□□□□□ -1
CD44-208ENST00000428726 TACO1Q9BSH4 297 aaKnown RBP8.8□□□□□ -1
CD44-208ENST00000428726 NIFKQ9BYG3 293 aaKnown RBP8.8□□□□□ -1
CD44-208ENST00000428726 SMARCAD1Q9H4L7 1026 aa8.8□□□□□ -1
CD44-208ENST00000428726 NMRK2Q9NPI5 230 aa8.8□□□□□ -1
CD44-208ENST00000428726 PARVAQ9NVD7 372 aa8.8□□□□□ -1
CD44-208ENST00000428726 NINJ2Q9NZG7 142 aa8.8□□□□□ -1
CD44-208ENST00000428726 NME7Q9Y5B8 376 aa8.8□□□□□ -1
CD44-208ENST00000428726 H7C0C1 242 aa8.79□□□□□ -1
CD44-208ENST00000428726 ACKR2O00590 384 aa8.79□□□□□ -1
CD44-208ENST00000428726 PODXLO00592 558 aa8.79□□□□□ -1
CD44-208ENST00000428726 LRCH4O75427 683 aa8.79□□□□□ -1
CD44-208ENST00000428726 BRAFP15056 766 aa8.79□□□□□ -1
CD44-208ENST00000428726 MIPP30301 263 aa8.79□□□□□ -1
CD44-208ENST00000428726 GBP1P32455 592 aa8.79□□□□□ -1
CD44-208ENST00000428726 GRIA1P42261 906 aa8.79□□□□□ -1
CD44-208ENST00000428726 ATP5OP48047 213 aa8.79□□□□□ -1
CD44-208ENST00000428726 NDUFV1P49821 464 aa8.79□□□□□ -1
CD44-208ENST00000428726 BPIFB4P59827 614 aa8.79□□□□□ -1
CD44-208ENST00000428726 OVGP1Q12889 678 aa8.79□□□□□ -1
CD44-208ENST00000428726 GRIK4Q16099 956 aa8.79□□□□□ -1
CD44-208ENST00000428726 TAPT1Q6NXT6 567 aa8.79□□□□□ -1
CD44-208ENST00000428726 ARMC9Q7Z3E5 817 aa8.79□□□□□ -1
CD44-208ENST00000428726 ZNF677Q86XU0 584 aa8.79□□□□□ -1
CD44-208ENST00000428726 UNC5BQ8IZJ1 945 aa8.79□□□□□ -1
CD44-208ENST00000428726 SLC4A11Q8NBS3 891 aa8.79□□□□□ -1
CD44-208ENST00000428726 RUNDC3BQ96NL0 473 aa8.79□□□□□ -1
CD44-208ENST00000428726 PEBP4Q96S96 227 aa8.79□□□□□ -1
CD44-208ENST00000428726 PAAF1Q9BRP4 392 aa8.79□□□□□ -1
CD44-208ENST00000428726 PLVAPQ9BX97 442 aa8.79□□□□□ -1
CD44-208ENST00000428726 PDZD7Q9H5P4 517 aa8.79□□□□□ -1
CD44-208ENST00000428726 DPP3Q9NY33 737 aa8.79□□□□□ -1
CD44-208ENST00000428726 PCYOX1Q9UHG3 505 aa8.79□□□□□ -1
CD44-208ENST00000428726 INPP5FQ9Y2H2 1132 aa8.79□□□□□ -1
CD44-208ENST00000428726 NEU2Q9Y3R4 380 aa8.79□□□□□ -1
CD44-208ENST00000428726 SNX10Q9Y5X0 201 aa8.79□□□□□ -1
CD44-208ENST00000428726 STYXL1Q9Y6J8 313 aa8.79□□□□□ -1
CD44-208ENST00000428726 TTC3P53804 2025 aa8.79□□□□□ -1
CD44-208ENST00000428726 GMNCA6NCL1 334 aa8.79□□□□□ -1
CD44-208ENST00000428726 TMEM191CA6NGB0 347 aa8.79□□□□□ -1
CD44-208ENST00000428726 NME3Q13232 169 aa8.79□□□□□ -1
CD44-208ENST00000428726 SNAPC2Q13487 334 aa8.79□□□□□ -1
CD44-208ENST00000428726 GOLGA7BQ2TAP0 167 aa8.79□□□□□ -1
CD44-208ENST00000428726 SH3D19Q5HYK7 790 aa8.79□□□□□ -1
CD44-208ENST00000428726 SPOCD1Q6ZMY3 1216 aa8.79□□□□□ -1
CD44-208ENST00000428726 GPR142Q7Z601 462 aa8.79□□□□□ -1
CD44-208ENST00000428726 TBC1D1Q86TI0 1168 aaPredicted RBP8.79□□□□□ -1
CD44-208ENST00000428726 FAM131BQ86XD5 332 aa8.79□□□□□ -1
CD44-208ENST00000428726 RXFP2Q8WXD0 754 aa8.79□□□□□ -1
CD44-208ENST00000428726 CFAP36Q96G28 342 aa8.79□□□□□ -1
CD44-208ENST00000428726 SLITRK1Q96PX8 696 aa8.79□□□□□ -1
CD44-208ENST00000428726 ARHGAP39Q9C0H5 1083 aa8.79□□□□□ -1
CD44-208ENST00000428726 SLC40A1Q9NP59 571 aa8.79□□□□□ -1
CD44-208ENST00000428726 L3MBTL1Q9Y468 752 aa8.79□□□□□ -1
CD44-208ENST00000428726 CEP83Q9Y592 693 aa8.79□□□□□ -1
CD44-208ENST00000428726 A8MXQ7 604 aa8.78□□□□□ -1
CD44-208ENST00000428726 ABLIM1O14639 778 aa8.78□□□□□ -1
CD44-208ENST00000428726 PPFIA2O75334 1257 aa8.78□□□□□ -1
CD44-208ENST00000428726 GAS8O95995 478 aa8.78□□□□□ -1
CD44-208ENST00000428726 LDHAP00338 332 aaKnown RBP8.78□□□□□ -1
CD44-208ENST00000428726 C6orf222P0C671 652 aaPredicted RBP8.78□□□□□ -1
CD44-208ENST00000428726 MYBL1P10243 752 aa8.78□□□□□ -1
CD44-208ENST00000428726 MAP2K2P36507 400 aa8.78□□□□□ -1
CD44-208ENST00000428726 HUNKP57058 714 aa8.78□□□□□ -1
CD44-208ENST00000428726 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
CD44-208ENST00000428726 CACNB2Q08289 660 aaPredicted RBP8.78□□□□□ -1
CD44-208ENST00000428726 TRIM32Q13049 653 aa8.78□□□□□ -1
CD44-208ENST00000428726 DNAJC3Q13217 504 aa8.78□□□□□ -1
CD44-208ENST00000428726 TFDP1Q14186 410 aa8.78□□□□□ -1
CD44-208ENST00000428726 TMEM132DQ14C87 1099 aa8.78□□□□□ -1
CD44-208ENST00000428726 PKN2Q16513 984 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms