RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 RXFP1Q9HBX9 757 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 UBN1Q9NPG3 1134 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 KCND2Q9NZV8 630 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 KLK14Q9P0G3 267 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 GIT1Q9Y2X7 761 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 LUC7L2Q9Y383 392 aaKnown RBP9.33□□□□□ -0.92
HDAC1-202ENST00000428704 ANK1P16157 1881 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 IGSF10Q6WRI0 2623 aa9.33□□□□□ -0.92
HDAC1-202ENST00000428704 AKAP13Q12802 2813 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 SHISA7A6NL88 538 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 C4orf47A7E2U8 309 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 SFI1A8K8P3 1242 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
HDAC1-202ENST00000428704 RECQL4O94761 1208 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 IDEP14735 1019 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 KRT9P35527 623 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 MPLP40238 635 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 GOLGA8FQ08AF8 430 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 NCBP1Q09161 790 aaKnown RBP9.32□□□□□ -0.92
HDAC1-202ENST00000428704 GOLGA8DPQ0D2H9 430 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 TUBB2AQ13885 445 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 NAB2Q15742 525 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 BMT2Q1RMZ1 405 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 TMEM132AQ24JP5 1023 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 VWA3BQ502W6 1294 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 FKBP15Q5T1M5 1219 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 ATF7IP2Q5U623 682 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 RAD9BQ6WBX8 426 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 TAS1R1Q7RTX1 841 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 CACNA2D4Q7Z3S7 1137 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 GPBP1Q86WP2 473 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 PROSER1Q86XN7 944 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 SPEM1Q8N4L4 309 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 GLIS3Q8NEA6 775 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 ITFG1Q8TB96 612 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 FAM3CQ92520 227 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 ANKRD7Q92527 254 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 DNASE1L2Q92874 299 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 DRC1Q96MC2 740 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 REEP2Q9BRK0 252 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 NTPCRQ9BSD7 190 aaKnown RBP9.32□□□□□ -0.92
HDAC1-202ENST00000428704 TUBB2BQ9BVA1 445 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 TIPINQ9BVW5 301 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 PTPRHQ9HD43 1115 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 VPS45Q9NRW7 570 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 SNTG2Q9NY99 539 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 KANSL3Q9P2N6 904 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 MYO1AQ9UBC5 1043 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 CACNG4Q9UBN1 327 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 POLIQ9UNA4 740 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 TRAF3IP3Q9Y228 551 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 PRG3Q9Y2Y8 225 aaPredicted RBP9.32□□□□□ -0.92
HDAC1-202ENST00000428704 MSRB2Q9Y3D2 182 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 DOCK8Q8NF50 2099 aa9.32□□□□□ -0.92
HDAC1-202ENST00000428704 TTC26A0AVF1 554 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 CCDC169A6NNP5 214 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 K7ERI5 159 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 K7ESF4 209 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 RNF225M0QZC1 329 aaPredicted RBP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 SLC16A4O15374 487 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 MEFVO15553 781 aaPredicted RBP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 RRP9O43818 475 aaKnown RBP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 ECI2O75521 394 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 SLU7O95391 586 aaKnown RBP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 C1RP00736 705 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 CEACAM1P13688 526 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 PLS3P13797 630 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 GAP43P17677 238 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 PROZP22891 400 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 MTIF2P46199 727 aaKnown RBP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 OR1G1P47890 313 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 ZBED6P86452 979 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 PPP2R3AQ06190 1150 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 C19orf57Q0VDD7 668 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 GRIK3Q13003 919 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 DMP1Q13316 513 aaPredicted RBP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 NFIL3Q16649 462 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 PLA2G2CQ5R387 149 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 LIN9Q5TKA1 542 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 TCEAL6Q6IPX3 200 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 SYT10Q6XYQ8 523 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 TOGARAM2Q6ZUX3 1019 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 EPM2AIP1Q7L775 607 aaPredicted RBP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 WDR5BQ86VZ2 330 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 LURAP1LQ8IV03 231 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 NPAS3Q8IXF0 933 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 CCDC170Q8IYT3 715 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 HACE1Q8IYU2 909 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 CEP120Q8N960 986 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 TMEM161BQ8NDZ6 487 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 CPLX3Q8WVH0 158 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 TCEAL3Q969E4 200 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 ACO2Q99798 780 aaKnown RBP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 PAAF1Q9BRP4 392 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 MKNK1Q9BUB5 465 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 TARS2Q9BW92 718 aaKnown RBP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 CDT1Q9H211 546 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 KCTD10Q9H3F6 313 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 NDST4Q9H3R1 872 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 BRD9Q9H8M2 597 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms