RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 LRRC52Q8N7C0 313 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 PDILTQ8N807 584 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 SH3RF2Q8TEC5 729 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 OSCP1Q8WVF1 389 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 CD101Q93033 1021 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 MYRFLQ96LU7 910 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 DUSP15Q9H1R2 295 aaPredicted RBP17.74■□□□□ 0.43
VARS-216ENST00000428445 GDAP2Q9NXN4 497 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 ZMYM5Q9UJ78 669 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 ITGA11Q9UKX5 1188 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 PCDHB13Q9Y5F0 798 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 MYOFQ9NZM1 2061 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 KIAA1549LQ6ZVL6 1849 aa17.74■□□□□ 0.43
VARS-216ENST00000428445 LDHAP00338 332 aaKnown RBP17.73■□□□□ 0.43
VARS-216ENST00000428445 USP17L7P0C7H9 530 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 BDNFP23560 247 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 IFNAR2P48551 515 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 SEC13P55735 322 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 DMC1Q14565 340 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 ST3GAL2Q16842 350 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 PLA2G2CQ5R387 149 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 STPG1Q5TH74 334 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 FAM171BQ6P995 826 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 CBWD2Q8IUF1 395 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 CPA6Q8N4T0 437 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 TOP6BLQ8N6T0 577 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 KBTBD7Q8WVZ9 684 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 MYLPFQ96A32 169 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 TRMT2BQ96GJ1 504 aaKnown RBP17.73■□□□□ 0.43
VARS-216ENST00000428445 ABCB6Q9NP58 842 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 CRTAC1Q9NQ79 661 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 FOXD4L1Q9NU39 408 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 UXTQ9UBK9 157 aaPredicted RBP17.73■□□□□ 0.43
VARS-216ENST00000428445 NME7Q9Y5B8 376 aa17.73■□□□□ 0.43
VARS-216ENST00000428445 ZFHX4Q86UP3 3567 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 CCDC163A0A0D9SF12 145 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 FRMD3A2A2Y4 597 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 TMEM191BP0C7N4 346 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 HDCP19113 662 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 PDCP20941 246 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 MPLP40238 635 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 STAT6P42226 847 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 LHX1P48742 406 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 USP4Q13107 963 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 CUL4AQ13619 759 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 SFTPA1Q8IWL2 248 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 GPD1LQ8N335 351 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 CAMKK1Q8N5S9 505 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 RDH13Q8NBN7 331 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 HPDLQ96IR7 371 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 LOXL4Q96JB6 756 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 ZC3H10Q96K80 434 aaKnown RBP17.72■□□□□ 0.43
VARS-216ENST00000428445 USP28Q96RU2 1077 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 SYT15Q9BQS2 421 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 TPSD1Q9BZJ3 242 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 OLFML3Q9NRN5 406 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 INTS13Q9NVM9 706 aa17.72■□□□□ 0.43
VARS-216ENST00000428445 MAGEC2Q9UBF1 373 aaPredicted RBP17.72■□□□□ 0.43
VARS-216ENST00000428445 HELZP42694 1942 aaKnown RBP17.71■□□□□ 0.43
VARS-216ENST00000428445 SOBPA7XYQ1 873 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 CST3P01034 146 aaPredicted RBP17.71■□□□□ 0.43
VARS-216ENST00000428445 SYT1P21579 422 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 HOXD13P35453 343 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 GRIK1P39086 918 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 DGKEP52429 567 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 AMPD2Q01433 879 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 CYP27A1Q02318 531 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 CFAP221Q4G0U5 840 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 C2orf27AQ580R0 203 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 SYT13Q7L8C5 426 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 ANKRD36BP1Q96IX9 119 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 RNF38Q9H0F5 515 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 TMEM206Q9H813 350 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 THADAQ6YHU6 1953 aa17.71■□□□□ 0.43
VARS-216ENST00000428445 PTPRDP23468 1912 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 K7EQS6 105 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 PCSK1P29120 753 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 TXLNAP40222 546 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 OPRD1P41143 372 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 LIMK1P53667 647 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 CACNA2D1P54289 1103 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 CREB5Q02930 508 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 MESP2Q0VG99 397 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 KCNB1Q14721 858 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 GAB4Q2WGN9 574 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 CCDC73Q6ZRK6 1079 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 LIMS2Q7Z4I7 341 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 CCDC33Q8N5R6 958 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 ATP2A3Q93084 1043 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 MMS19Q96T76 1030 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 MRPL45Q9BRJ2 306 aaKnown RBP17.7■□□□□ 0.42
VARS-216ENST00000428445 NUP205Q92621 2012 aa17.7■□□□□ 0.42
VARS-216ENST00000428445 LEFTY2O00292 366 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 APBB3O95704 486 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 ABL1P00519 1130 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 GBP1P32455 592 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 SLC6A11P48066 632 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 FBXO43Q4G163 708 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 MDH1BQ5I0G3 518 aa17.69■□□□□ 0.42
VARS-216ENST00000428445 TTC30AQ86WT1 665 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms