RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 PLCB3Q01970 1234 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 SLC25A11Q02978 314 aaKnown RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 CACNB2Q08289 660 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 IFFO1Q0D2I5 559 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 CDO1Q16878 200 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 RAB6CQ53S08 254 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 TFDP3Q5H9I0 405 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 UBAP2Q5T6F2 1119 aaKnown RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 FAM183BPQ6ZVS7 135 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 GRK7Q8WTQ7 553 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 ART4Q93070 314 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 MCRS1Q96EZ8 462 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 B3GNT5Q9BYG0 378 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 TXLNGYQ9BZA5 131 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 RAB6CQ9H0N0 254 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 HOMER3Q9NSC5 361 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 ZNF236Q9UL36 1845 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 DNPEPQ9ULA0 475 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 ST3GAL5Q9UNP4 418 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 ZNF148Q9UQR1 794 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 TRIP12Q14669 1992 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 TP73O15350 636 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 RPS6KA5O75582 802 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 RNF8O76064 485 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 SHBGP04278 402 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 CD48P09326 243 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 CCDC130P13994 396 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 PDGFRAP16234 1089 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 IVDP26440 423 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 GNL1P36915 607 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 CDKN2BP42772 138 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 AFF1P51825 1210 aaKnown RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 MRPS6P82932 125 aaKnown RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 SLC29A2Q14542 456 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 HADHQ16836 314 aaKnown RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 C15orf59Q2T9L4 293 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 LRIG3Q6UXM1 1119 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 ZNF365Q70YC5 407 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 FNIP1Q8TF40 1166 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 HSPH1Q92598 858 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 OSBPL7Q9BZF2 842 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 MIS12Q9H081 205 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 DNAJC17Q9NVM6 304 aaKnown RBP10.95□□□□□ -0.66
HDAC9-210ENST00000428307 PSD3Q9NYI0 1048 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 HESX1Q9UBX0 185 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 LCMT1Q9UIC8 334 aa10.95□□□□□ -0.66
HDAC9-210ENST00000428307 hCG_1818297A0A087WSY0 165 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 SEPT4O43236 478 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 AOC2O75106 756 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 ASGR1P07306 291 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 KCNE1P15382 129 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 ADORA2BP29275 332 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 CCND3P30281 292 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-210ENST00000428307 MIPP30301 263 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 GBP1P32455 592 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 ATP11AP98196 1134 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 BYSLQ13895 437 aaKnown RBP10.94□□□□□ -0.66
HDAC9-210ENST00000428307 TRNP1Q6NT89 227 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 GLIS1Q8NBF1 620 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 APPL2Q8NEU8 664 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 KBTBD7Q8WVZ9 684 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 RXFP2Q8WXD0 754 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 ATP6V1G3Q96LB4 118 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 PWWP2AQ96N64 755 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 EPB41L4BQ9H329 900 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 PABPC3Q9H361 631 aaKnown RBP10.94□□□□□ -0.66
HDAC9-210ENST00000428307 XPNPEP3Q9NQH7 507 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 DDX56Q9NY93 547 aaKnown RBP10.94□□□□□ -0.66
HDAC9-210ENST00000428307 USP18Q9UMW8 372 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 ZSWIM8A7E2V4 1837 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 SCN1AP35498 2009 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 TMEM88BA6NKF7 163 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 PTGESO14684 152 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 XPOTO43592 962 aaKnown RBP10.94□□□□□ -0.66
HDAC9-210ENST00000428307 LIASO43766 372 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 KPNA6O60684 536 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 CHRNA1P02708 482 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 KRT7P08729 469 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 ATF2P15336 505 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 HPDP32754 393 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-210ENST00000428307 TAF6P49848 677 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 ITGA8P53708 1063 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 LILRA4P59901 499 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 PTK6Q13882 451 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 KCNA10Q16322 511 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 KRT71Q3SY84 523 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 XKR4Q5GH76 650 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 POLNQ7Z5Q5 900 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 KCTD6Q8NC69 237 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 SLC35F5Q8WV83 523 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 LPPQ93052 612 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 SNF8Q96H20 258 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 CFAP57Q96MR6 1250 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 SNX25Q9H3E2 840 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 FAM124BQ9H5Z6 455 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-210ENST00000428307 C10orf88Q9H8K7 445 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 TMBIM4Q9HC24 238 aa10.94□□□□□ -0.66
HDAC9-210ENST00000428307 CITO14578 2027 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 DCAF8L1A6NGE4 600 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms